ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_232079_6

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 3427..4278

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQ67_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 281.0
  • Bit_score: 321
  • Evalue 5.40e-85
Uncharacterized protein {ECO:0000313|EMBL:GAO54971.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 283.0
  • Bit_score: 565
  • Evalue 3.00e-158
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 287.0
  • Bit_score: 270
  • Evalue 3.10e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
GTGCGCACTGTCCTGACAGCCCTTGCCGCCAGCCTGACCATGGCGGTCGCCGGCCTGGTTCCCCAGTCCTCCGTGCAGGCCGAAACGCCGGCCCCCACCGCAACATCGCCGGCAATGGCGGCAGTGCTGGCCGATCCGCGCCGCGATGGCGACCGTGCCCGTGATATCTGGCGTCACCCCGCCGAAACGCTGGGCTTCTTCCGCGTGCAGCCGGGCATGACGGTGGTGGACTATCTGCCGTCGGGGGGATGGTACACCCGCGTTCTCGTGCCGTATCTCGGGCCGCAGGGCCAGTATATCGGCCTCAATCCCGGTGTCGCCAACGCACCCGAACGCACGAAGCAGGCCTTCGGCAACCTCGGCGCGACCTTCCCGGCGAAGGCGGCGGGATGGACCGGCGCCCCCGCCGAGCGCATCCTTGCCTTCAACACCGACAGCCTGCCGGCCGATCTCGATGGCAAGGTCGATCGCGCGCTGATCTTCCGCGAAGTGCACAACATGTGGCGCGGGGGCTGGCTCTATCCCGATCTGCTGGCGATCCGCCGCCTGCTCAAGCCCGATGGCCTGCTCGGCATCGTCCAGCATCGTGCCCGGCCCGATGCCCCGGCCTCCTATACCGATGGGAGCAAGGGCTATCTGCGCGAAAAGGACGTGATCGCCATGGTCGAGGCGCACGGTTTCGAACTCGTCGGCAAGAGCGAGATCAACGCCAATCCGAAGGATCCGGCGAATCACCCCGCCGGCGTCTGGTCGCTTCCGCCCACTTTCTCGCAAGGGGATGCCGATCGCATGCGCTTTGCCGGCGTGGGGGAAAGCGACCGGATGACATTGCTGTTCCGCAAGCGCCCCTGA
PROTEIN sequence
Length: 284
VRTVLTALAASLTMAVAGLVPQSSVQAETPAPTATSPAMAAVLADPRRDGDRARDIWRHPAETLGFFRVQPGMTVVDYLPSGGWYTRVLVPYLGPQGQYIGLNPGVANAPERTKQAFGNLGATFPAKAAGWTGAPAERILAFNTDSLPADLDGKVDRALIFREVHNMWRGGWLYPDLLAIRRLLKPDGLLGIVQHRARPDAPASYTDGSKGYLREKDVIAMVEAHGFELVGKSEINANPKDPANHPAGVWSLPPTFSQGDADRMRFAGVGESDRMTLLFRKRP*