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2019_SCN_bioreactor_t3_biofilm_scaffold_260513_9

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 7323..7682

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GC10_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 108.0
  • Bit_score: 173
  • Evalue 7.60e-41
Transcriptional regulator of gntR family {ECO:0000313|EMBL:GAO54406.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 119.0
  • Bit_score: 234
  • Evalue 6.70e-59
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 108.0
  • Bit_score: 173
  • Evalue 2.20e-41

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGAGCATGGCCAGCCGCCCCGTCTACCTCAAGCTGCGCGACCAGATCGCCGCCGCCATTATCGAAGGCCGCTACCCGGATGGGGCCATGCTGCCGTCCGTCCGCGCGTTTGCCGCCGAGCAGGGCGCCAACCCGCTGACAGTGGCCAAGGCCTACCAGCAGTTCCAGGACGAAGGGCTGGTCCATGTGCAGCGCGGGATCGGCATGTTCGTCGCTCCGGGCGCGGCGCGAATCCTGCTCGAACGCGAACGGCAGGCCTTCCTGAGCGACGAATGGCCCCACATCGCCACCCGAATCCGGCGGTTGGGGCTGGATGCGGACGCATTATTGCATGAAAACGCCCCTGAATCGGTCAAATAG
PROTEIN sequence
Length: 120
MSMASRPVYLKLRDQIAAAIIEGRYPDGAMLPSVRAFAAEQGANPLTVAKAYQQFQDEGLVHVQRGIGMFVAPGAARILLERERQAFLSDEWPHIATRIRRLGLDADALLHENAPESVK*