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2019_SCN_bioreactor_t3_biofilm_scaffold_305745_1

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(1..2838)

Top 3 Functional Annotations

Value Algorithm Source
nodulation protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4D5E7 similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 949.0
  • Bit_score: 1585
  • Evalue 0.0
Cobalt-zinc-cadmium resistance protein czcA {ECO:0000313|EMBL:GAO55214.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 946.0
  • Bit_score: 1780
  • Evalue 0.0
mdtC; multidrug resistance protein MdtC similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 955.0
  • Bit_score: 1105
  • Evalue 0.0

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2838
ATGAACATTTCCGCGCCTTTCATCCGCCGGCCCGTCGGCACGATCCTGTTGATGATCGGACTGATGCTGGCCGGTATCGGCGCGTTCTTCAGCCTGCCGGTCGCACCGCTGCCGGCGGTCGATTTCCCGACGATCATGGTGCAGGCGAACCTGCCCGGCGCCAGCCCCTCGACCATGGCGGGCAGCGTCGCTGCGCCGCTCGAACGGCACCTCGGCACGATCGCCGGGGTCAGCGAGATGACGTCCCGCTCCGGGGTCGGATCGTCGCAGATCGTGCTCCAGTTCGATCTTTCGCGCGACATCGATGGGGCGGCGCGCGATGTGCAGGCGGCGATCAACGCCTCGCGCGCGGACTTGCCCGCCACGCTCAAGACCAATCCCAGCTACCGCAAGGCGAACCCCGCCGAAGCGCCGGTGCTGATCCTCGCCCTGACCTCTCCCACGCGCAGCGCTTCGGAAATCTACGACGCGGTTTCCACGGTGGTGCAGCAGAAGCTGCTCCAGGTGCAGGGCGTGGGCAACGTGGAACTGGGCGGCGCGGCGCTGCCGTCCGTGCGGGTGGAGGTCAATCCGCTGGCGCTGTCGCGCTTCGGCATCGCGCTGGAAGACGTGCGCACCGCGCTCCAGTCCGAAAGCGCCAATCGCCCGCGCGGCGTGATGGATACCGGCACCTACAGTTGGCAGGTCTATTCCAATAAGGCCGGCCGCTATGCCGCGGATTACCGCAACACCATCATCGCCTGGCGCAACGGCGCGGCGGTGCGCCTTGCCGACATCGCCGAAGTTTCCGACGGCCCCGAAGACATCCGCACGATGGGGCTGTTCAACGGCGAACGCGCGGTGCCGATCCTCGTCAGCCGCCAGCCGGGCGCCAACATCGTCGCCACAGTGGACGCGCTCAAGGCGCAACTGCCCGCCCTGCAGGCCGCGCTGCCGCCCGACATCCACCTGTCGATCGCGTCGGACCGGACGCTGACGATCCGCGCCTCGCTGCACGAGGTGGAAATCACGCTGCTGATCTCGATCCTGCTGGTGGTGCTGGTGGTCAGCCTGTTCCTGCGCAGTTGGCGCGCCACGCTGATTCCGGCGGCAGCGGTCATCGCCTCGCTGCTGGGCACGCTGGGCGTGATGTATCTGGCCGGGTTCTCGCTCGACAACCTCTCGCTCATGGCGCTGACCGTGGCGACGGGCTTCGTCGTCGATGACGCGATCGTGGTCGTGGAAAACGTCAGCCGCCACATCGAGGAAGGCATGCAGCCGATGGAAGCCGCGCTGAAGGGCGCGCGCGAGGTGGGCTTCACCGTGATCTCGATCTCGGTCAGCCTGATCGCGGTGTTCGTGCCGCTGATCTTCATGGGCGGCCTGGTCGGCCGCCTCTTCCGCGAATTTGCGCTGACGATGGCGGTCGCGGTGGGGATCAGCCTGATCGTCTCGCTGACCACCACGCCAATGCTGGCGGCCCGGCTGCTCCGCAACGAAGAACGCGAAAGCCGGCTGATGCGCACCGCCCGCCACGCGTTCGACTGGGCGCAGGCGCGCTATACGCGCAACCTCGACTGGGCGCTGGCGCATCGCGGAATCGTGCTGCTGATCCTCCTCGGCACGGTGGTGCTCAACATCTACCTGATCGGCGTCTCGCCCAAGGGCTTCTTTCCGCAACAGGATACCGGCGGTCTGATGGGCGGCGTGCGCGCCGACCAGAGCATTTCCTTCACCGACCTGCAGGACAAGATGACGCGGATCACCCGGATCGTGAAAAGCGATCCGGCGGTGGCCACGGTGGTCGCCTTCGCCGGCGGATCGCGCGCGGGCGGCGGCTTCCTGTTCGCCACACTCAAGCCGCGCAGCCAGCGCCCGCCCGCGCAGGAAGTGATCGCCCGGCTGCGGCCGAAGCTCGCCCGCGTGCGCGGCGTCAGCCTGTTCATCAATCCGGTGCAGGATCTCCAGGCCGGCGGCCGGCAGACCAACAGCACCTATCAATACGTTCTGAAGGCGGACAGCCCCGATACCCTGAAGGCGGCCGGGCAGAAGCTGGTCGATGCGCTCAAGACGCATCCGGACCTAATCACCGATGTCGATATCGACCAGCAGGATGCCGGCGCCAACGCCTTCGTCGAAGTGGACCGCGATGCCGCCGCGCGGCTGGGCATCCTGATGCAGACCGTCGATGCCACGCTCTATGACGCCTTCGGCCAGCGGCAGGTGGCGAACATCTATTCGGGGCTGAACCAGTACCATGTGGTGATGGAAGCGGCGCGCCAGTTCAACGGTTCGCCCGATGCCCTGGCCAACATCTATCTGCCCGCCGGCACCGCCCCCGGAACCGTCACGGCGGCGGCGGGAACCGGTGGCACCGGATCGGGCGGTTCGGCTACCGCCTCCGGCACCGCCGTCAGCACCTCGGCCCGCACCATGGCGCCGCTTTCGGCGATCGCCCGCTGGTCCACCGGATCGACCAACGCGCAGGTCAGCCATTCGGACGGCGAACCTTCGGCCACGATCTCGTTCAACCTTCCGCGCGGCGTCTCGCTGGGGATGACGGCGCAGATGATCGCGCAAGTGCAGGCATCGCTCGCCCTGCCCGCCACCGTCCACGGCGAATTCGGCGGCACCGCCAAGGTCTTCGCGCAATCGACATCATCGATGCCGCTGCTGATCCTGGCCGCGCTGGTCGCCATCTACATCGTGCTGGGCATCCTCTACGAAAGCGCGATCCACCCGCTGACCGCGCTGTCCACGCTGCCCTCGGCCGGCGTCGGCGCGATGATCGCGCTGATTGCCACGGGCGGCGAATTCGACCTGATCGCGCTGATCGGCATCATCCTGCTGATCGGCATC
PROTEIN sequence
Length: 946
MNISAPFIRRPVGTILLMIGLMLAGIGAFFSLPVAPLPAVDFPTIMVQANLPGASPSTMAGSVAAPLERHLGTIAGVSEMTSRSGVGSSQIVLQFDLSRDIDGAARDVQAAINASRADLPATLKTNPSYRKANPAEAPVLILALTSPTRSASEIYDAVSTVVQQKLLQVQGVGNVELGGAALPSVRVEVNPLALSRFGIALEDVRTALQSESANRPRGVMDTGTYSWQVYSNKAGRYAADYRNTIIAWRNGAAVRLADIAEVSDGPEDIRTMGLFNGERAVPILVSRQPGANIVATVDALKAQLPALQAALPPDIHLSIASDRTLTIRASLHEVEITLLISILLVVLVVSLFLRSWRATLIPAAAVIASLLGTLGVMYLAGFSLDNLSLMALTVATGFVVDDAIVVVENVSRHIEEGMQPMEAALKGAREVGFTVISISVSLIAVFVPLIFMGGLVGRLFREFALTMAVAVGISLIVSLTTTPMLAARLLRNEERESRLMRTARHAFDWAQARYTRNLDWALAHRGIVLLILLGTVVLNIYLIGVSPKGFFPQQDTGGLMGGVRADQSISFTDLQDKMTRITRIVKSDPAVATVVAFAGGSRAGGGFLFATLKPRSQRPPAQEVIARLRPKLARVRGVSLFINPVQDLQAGGRQTNSTYQYVLKADSPDTLKAAGQKLVDALKTHPDLITDVDIDQQDAGANAFVEVDRDAAARLGILMQTVDATLYDAFGQRQVANIYSGLNQYHVVMEAARQFNGSPDALANIYLPAGTAPGTVTAAAGTGGTGSGGSATASGTAVSTSARTMAPLSAIARWSTGSTNAQVSHSDGEPSATISFNLPRGVSLGMTAQMIAQVQASLALPATVHGEFGGTAKVFAQSTSSMPLLILAALVAIYIVLGILYESAIHPLTALSTLPSAGVGAMIALIATGGEFDLIALIGIILLIGI