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2019_SCN_bioreactor_t3_biofilm_scaffold_305745_4

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(7479..7973)

Top 3 Functional Annotations

Value Algorithm Source
MucR-family transcriptional regulator n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z8U3_SPHJU similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 187.0
  • Bit_score: 199
  • Evalue 1.80e-48
Transcriptional regulator {ECO:0000313|EMBL:GAO55217.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 155.0
  • Bit_score: 289
  • Evalue 2.40e-75
MucR-family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 187.0
  • Bit_score: 199
  • Evalue 5.10e-49

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGGATAAATCAGATCTGACGGCTTTAACGGTGCAACTGTTAAGTGCCTATGTCGCCAACAACAGCCTCCCCAGTAACGAGCTGGCATCGCTTATCGAAACGACGCGCAATGCACTTGCCGGAAAGGTCGAGGCACCGGCTCCGGAAGCACCTGAATTCGTGCCCGCGGTCTCGGTCCGCAAAAGCACGGCCTCGCGCGATCATCTGATCAGCCTGATCGACGGGAAACCTTATCGCAGCCTGAAGCGGCACTTGACCAGCCACGGCCTTACTCCTGACGAATACCGTGAACGCTACAAGCTGCCAAAAGACTATCCGATGGTGGCGCCGAGCTATTCGGAACAGCGGCGCGCGGTCGCGCAAAGGCTGGGTCTGGGTCGCAAGCCCAAGGTGGCCAAGCTGGCTGCGGACCCCGTCGCCACCAAACCGGCCGCGCCCGCGAAGAAGGCGGCAAGTACCCGGAAACCACGCAAGGCAGCCGCTGAAACCGCTTGA
PROTEIN sequence
Length: 165
MDKSDLTALTVQLLSAYVANNSLPSNELASLIETTRNALAGKVEAPAPEAPEFVPAVSVRKSTASRDHLISLIDGKPYRSLKRHLTSHGLTPDEYRERYKLPKDYPMVAPSYSEQRRAVAQRLGLGRKPKVAKLAADPVATKPAAPAKKAASTRKPRKAAAETA*