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2019_SCN_bioreactor_t3_biofilm_scaffold_299623_1

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 3..395

Top 3 Functional Annotations

Value Algorithm Source
Na+/proline symporter n=1 Tax=Novosphingobium sp. AP12 RepID=J2Q484_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 127.0
  • Bit_score: 210
  • Evalue 6.20e-52
Uncharacterized protein {ECO:0000313|EMBL:GAO53502.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 130.0
  • Bit_score: 254
  • Evalue 5.20e-65
sodium:solute symporter similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 130.0
  • Bit_score: 207
  • Evalue 1.50e-51

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
TACGTGCAGGCGGGCCGCGCCGGCATGGGCGTGATCGGCTTCGCGATGTTCGTGATGGCGATCGTCTCGTTCTACTGGCAGCGCTATTCGGACATGGGCCTGCTGGAATTCGCGCTGCAGGTCATGGTGTTCACTTACGCGGGCCTGCTCGGCGTCTATTTCACCGCGCTGTTCACGCGGCGGGGAACGACCGGATCGGTCATCGCATCGCTGCTGGTGGGCTTCTTCACCGTGCTGCTGCTGCAACCCGCGATCGCGCGCGCGATCGGGCTGCCGGCCGCGCTGCTCGGCCTGTCGTTTCCCTTCCAGCTCTGCATTGGCACGCTGGTGGCCTTCGTGGTCTGTGCCGTGGTGCCGGGGCCGGGCGGGCCAGCGGTTTCCGAAACAGATTGA
PROTEIN sequence
Length: 131
YVQAGRAGMGVIGFAMFVMAIVSFYWQRYSDMGLLEFALQVMVFTYAGLLGVYFTALFTRRGTTGSVIASLLVGFFTVLLLQPAIARAIGLPAALLGLSFPFQLCIGTLVAFVVCAVVPGPGGPAVSETD*