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2019_SCN_bioreactor_t3_biofilm_scaffold_299623_11

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 13423..13899

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AsnC family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V9U1_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 154.0
  • Bit_score: 178
  • Evalue 3.10e-42
Transcriptional regulator of asnC family {ECO:0000313|EMBL:GAO53472.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 158.0
  • Bit_score: 307
  • Evalue 8.20e-81
AsnC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 154.0
  • Bit_score: 178
  • Evalue 8.90e-43

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGGCGCAGGAACGGCTGGACAGGTTCGATCGCAAGATCCTGCAGCACATCCAGATTCGCGGCGATCTGGGGCCGGGCGAACTGAGCACGCTCGTTCACCTCTCGCCCTCGCAATGTTCGCGGCGGTTGCATCGTCTGCGCGAACAGGGCTTTATCGAACGTACCGCCGCGATCCTCGATCCGGCAAAGCTCAATCTGGGCATTTCCGCCTATATCGCGGTGAAGCTGCGCTCGCAGACCGGCGAGGCCGAGCGCCTGTTCCGCGCGCGGATCGAAGCGCTGCCCGAAGTGATCTCGTGCGATTACACCACGGGGGAGATGGACTTCATGCTGCGGATCTATACCCACGATCTGGAAAGCTACAGCGAGTTCCTTTCCGCGAAGCTGCTGATCGGGGAGGAGATCGATAACGTCCGCACGTTCATCGTGATGATGCAGCTCAAGAAAACGACCGCCCTGCCGCTCGATTTCTGCTGA
PROTEIN sequence
Length: 159
MAQERLDRFDRKILQHIQIRGDLGPGELSTLVHLSPSQCSRRLHRLREQGFIERTAAILDPAKLNLGISAYIAVKLRSQTGEAERLFRARIEALPEVISCDYTTGEMDFMLRIYTHDLESYSEFLSAKLLIGEEIDNVRTFIVMMQLKKTTALPLDFC*