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2019_SCN_bioreactor_t3_biofilm_scaffold_299623_16

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(19363..21324)

Top 3 Functional Annotations

Value Algorithm Source
Glucose dehydrogenase, PQQ-dependent {ECO:0000313|EMBL:GAO53467.1}; EC=1.1.5.2 {ECO:0000313|EMBL:GAO53467.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 653.0
  • Bit_score: 1336
  • Evalue 0.0
quinoprotein glucose dehydrogenase (EC:1.1.5.2) similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 643.0
  • Bit_score: 552
  • Evalue 1.60e-154
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036EFD52 similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 650.0
  • Bit_score: 823
  • Evalue 7.70e-236

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1962
ATGGCCGGTTTCGACAGGCGGACGACCATGAAGGGGGCGGGCGCCGTTGCGGCGCTCGCCCTCGCCCCCGGCCTCGCCGCGCGTGTCCGTCCAACGCGCAACGCCGCCGAATGGCCGGTCTATGGGGCGACCAACGCGGCGACGAAGTATTCGCCGCTCGACCAGATCGACGCCTCGAACGTCGCCACGCTGGAAGTGGCGTGGGAATGGACATCGCCGGACGCGACCATCCTCGCGGCGCACCCCGAATTGCAGCCCGGCGAATTCCAGGCAACGCCGATCATGGTCGATGGCCGCCTGTTCACCTCCACGGCGATGAGTCAGGTGGCGGCGATCGATCCCGCTTCGGGACGGACGCTGTGGGTTTACGACCCCGGCACCTGGCGGCACGGCTATCCCACCAGCAAGGGCTTCCAACACCGGGGCGTGGCCTTCTGGCGCGCGGGGAAAGATGCGCGCGTCCTCATCGCCACAGGCGACAACCGCCTGATCGCGCTCGACGCAGCCAGCGGAACCCCGGTTGCCGGGTTCGGGGAAGAAGGGGAAGTGGACCTGCTCCGCTCCTCGGGAGAGCCGGTTCCCGACGCCCCCGCCCGATTGATCGGCGCAACCTCGCCACCGGTGGTCTGCCGCGACACCGTGATCGTGGGCCAGTACATCAACGACGTGCCGAGCCGTCCGGTCATGCCCGTGGGCGTCATCCAGGGTTTCGACGCGCGCTCCGGGCGCCACAAGTGGTCGTTCCGGATGATCCCCCGCGCTGGTGAAGCGGGCGCCGAAACATGGCGCGAAGGCTCCGCCGAACGCACCGGCAACGCCAATGCCTGGGCACCGATGAGCGCGGACGACGATCTCGGCCTAGTCTATGTCCCCGGCACCTGCCCGACCAACAACTTCTTCGGCGGAGACCGGCCCGGCGACAACCTGTTCGGCAACGCGCTGGTAGCGCTCGACGTCGAAACGGGCTTGCGCCGCTGGCACTACCAGCTCGTCCACCACGACATCTGGGACTACGACATTCCCTGCGCCGGCAATCTCATCGACATCATGGTCGAAGGGAAGCGCATCCCCGCCATCGCGCAAGTCACCAAGCAGGGCTTCTGCTTCGTGTTCGATCGCCGCGACGGCAAGCCGGTCTGGCCGATCGAGGAACGGCCGGTGCCGCAATCGACCATCGCGGGCGAACGCACCGCCGCGACGCAGCCCTTCCCCACCAAGCCGCCGCCGTTCGACCGGCAGGGCATCGGCGAAGACGACCTGATCGATTTCACGCCGGCCCTGCGTGACGAGGCCAGGACCATTCTGGCGAAATACACCGCCGGGCCGCTGTTCACGCCGCTGGGTACGCAGCCGACCATCGTGCTGCCGAGCTGGGTGGGCGGAGCGAACTGGTGGGGCGCCGCGGCCGATCCGGAAACCGGGATGCTCTATGTCCCGTCGCTGACCGCGCCGGTGTCCATGGCGCTGGACGGGGACGGCAAGCGCACCGACGCGGCCGACGGCGACAGCGAGATCGCGGGCCGTGCCAGCGTCGTACGCGGACCGGGCGGCCTGCCGCTGCTCAAGCCGCCTTATGGCCGCATCACCGCGATCGATCTCAATCGGGGCGCGATCGCGTGGACCCGCGCCAATGCGCCGGGCGCGCGCGACCTGCCGATGTTCCGGCCCTACAATCCTGGCTGGATCGGCACGACCAGCCGCACCGGTCCGCTGCTGACGCGGACGCTGCTGTTCATGGGCGAAGGGCCGCACAGCCCGGCGCAGTCGCGCAAGATGCTGTGCGCCTACGACAAGGCGACAGGGGCGCTCCGGGCGGAGATCCCGCTGCCCGATCACACGCTGGGGCCGCCAATGACCTACATGGCCGACGGCCGGCAATTCATCGTATGCGGCATGGGCTTCCGCAAGGCGCCGCACAGGCTGGTCGCGCTGGCGCTGCCCCCAACCAGGAAGGAACCATGA
PROTEIN sequence
Length: 654
MAGFDRRTTMKGAGAVAALALAPGLAARVRPTRNAAEWPVYGATNAATKYSPLDQIDASNVATLEVAWEWTSPDATILAAHPELQPGEFQATPIMVDGRLFTSTAMSQVAAIDPASGRTLWVYDPGTWRHGYPTSKGFQHRGVAFWRAGKDARVLIATGDNRLIALDAASGTPVAGFGEEGEVDLLRSSGEPVPDAPARLIGATSPPVVCRDTVIVGQYINDVPSRPVMPVGVIQGFDARSGRHKWSFRMIPRAGEAGAETWREGSAERTGNANAWAPMSADDDLGLVYVPGTCPTNNFFGGDRPGDNLFGNALVALDVETGLRRWHYQLVHHDIWDYDIPCAGNLIDIMVEGKRIPAIAQVTKQGFCFVFDRRDGKPVWPIEERPVPQSTIAGERTAATQPFPTKPPPFDRQGIGEDDLIDFTPALRDEARTILAKYTAGPLFTPLGTQPTIVLPSWVGGANWWGAAADPETGMLYVPSLTAPVSMALDGDGKRTDAADGDSEIAGRASVVRGPGGLPLLKPPYGRITAIDLNRGAIAWTRANAPGARDLPMFRPYNPGWIGTTSRTGPLLTRTLLFMGEGPHSPAQSRKMLCAYDKATGALRAEIPLPDHTLGPPMTYMADGRQFIVCGMGFRKAPHRLVALALPPTRKEP*