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2019_SCN_bioreactor_t3_biofilm_scaffold_299623_18

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 23690..24292

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z6G4_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 32.0
  • Coverage: 194.0
  • Bit_score: 89
  • Evalue 3.20e-15
Transcriptional regulator of tetR family {ECO:0000313|EMBL:GAO53465.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 200.0
  • Bit_score: 399
  • Evalue 2.00e-108
transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 30.7
  • Coverage: 179.0
  • Bit_score: 79
  • Evalue 1.20e-12

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGACGCAGAGCTATTCGGAAATGCTGGACGCGCATCGTGCCCGCAGGCGGGAGACGCTGCTGCTCGCGGCGGCGACGGTGCTGAACGAGCGGGGCCTGCGCCAGACGACCATGGATCAGGTGGCGCAGGGCGCGGGTGTCTCGAAGGTCGTGCTCTATCGCTACTTCGAATCGAAGGACCGGCTGGTGCACGAAGTGCTGTCCGATGTCGTGGATGCGCTGTTGCGCGCCGACGACGTGGACGTCGACTGGTGGACCAAGCGATTGCACCGGACGCTGGCGGTCGCCCGCTCGCATGCCGCCGCGATGTGCCTGCTGGTGCGGCATGCCTCGCACGATCCGGAATTCGGGATTCATTTCGACCGCCTCACGCAGGCGCTGGTCGGACGTGTGGAGGAGCGTCAGGCCGCGATCCTGGGGCCGGAAAGCAGCGACACGCCGGGCGATGTGCGCATCCTGGCCGAATCCGTCACCGCCTTCCTGCTCGACGCCTATGTGCGCTGGATGGAGAACGGCGATCCGGCCCGGGATGAGCAGTTCCTCGCCTGGATCACGTCTTCGGTCCGGGCCACGGTCTATTACTGGCGAGGTCTCGCGCCCTGA
PROTEIN sequence
Length: 201
MTQSYSEMLDAHRARRRETLLLAAATVLNERGLRQTTMDQVAQGAGVSKVVLYRYFESKDRLVHEVLSDVVDALLRADDVDVDWWTKRLHRTLAVARSHAAAMCLLVRHASHDPEFGIHFDRLTQALVGRVEERQAAILGPESSDTPGDVRILAESVTAFLLDAYVRWMENGDPARDEQFLAWITSSVRATVYYWRGLAP*