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2019_SCN_bioreactor_t3_biofilm_scaffold_308253_3

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(1469..2107)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3E9_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 208.0
  • Bit_score: 311
  • Evalue 5.50e-82
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 214.0
  • Bit_score: 402
  • Evalue 3.30e-109
outer membrane lipoprotein carrier protein LolA similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 208.0
  • Bit_score: 311
  • Evalue 1.50e-82

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGCACGCCGTCGCGGTTTCCGCGATGGCGTTCGCTGGCCTTGGCGCGGTGACGGCCTCGGCCCCGCTCGCGGCGCAAAACGTCCCCGCGCCCGCCACCGACGTTGATCGGGCGGTAAGCGCGCTGCGCGCGATCACCACGATGCGCGCCAACTTCGTCCAGACAGACCGGTCCGGCCAGTCGCTGTCCGGGGTGATGACGATGAAGCGGCCCGGCAAGATCCGCTTCCAGTACGAACGCGGCGTACCGTTGCTGATCGTCTCGGACGGTCGCGCGCTGACGCTGATCGACTATGAAGTGCGGCAGGTCCAGCGCTGGCCGATCCGCAACAGTCCGCTGGGCGCGCTGCTCGATCCCAGCAAGGACGTCGCCCGCTTCGCGCGGCTGATTCCGACCAACCATCCCAGCGTGGTCAGCATCGAGGTGCGCGATACGCGCCACCCCGAATACGGCACGATCACGCTGATCTTCATCCGCAAGGCTTCCGCGCCGGGCGGACTCGAACTCGATAGCTGGGTCGCGCTCGATTCGCAGAACAAGCGAACCACCGTGCGCCTGTCGGGCCAGCAATACGGTATCGATGTGCCGGAAAACACGTTCCGCTGGAACGATCCGCGCCCAAACTCGCCCAAGCACTGA
PROTEIN sequence
Length: 213
MHAVAVSAMAFAGLGAVTASAPLAAQNVPAPATDVDRAVSALRAITTMRANFVQTDRSGQSLSGVMTMKRPGKIRFQYERGVPLLIVSDGRALTLIDYEVRQVQRWPIRNSPLGALLDPSKDVARFARLIPTNHPSVVSIEVRDTRHPEYGTITLIFIRKASAPGGLELDSWVALDSQNKRTTVRLSGQQYGIDVPENTFRWNDPRPNSPKH*