ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_20476_6

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 6672..7064

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B3F2E similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 130.0
  • Bit_score: 235
  • Evalue 3.00e-59
histone family protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 114.0
  • Bit_score: 178
  • Evalue 7.30e-43
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ADG67105.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 114.0
  • Bit_score: 178
  • Evalue 3.60e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 393
GTGACCAAAAAAGAAATCGTCAAAGAGATTTCCGAAGCGCTTGGGATGACACAGCTCAAGACCAAAGAGATCGTTCAAAAGACGTTTGATGCCATCGTGAAAACGCTGGTCGAGGACGGTCGAATTGAACTTCGCAATTTCGGGGTGTTTGAAGTCAAGAAACGAGCTGCACGGAAAGCACGTAATCCACGTACAGGTGACAAGGTTTTTGTTCCTGAGAAATTCGTGGTGACGTTCAAGCCGGGCAAAGAGATGGAAGAGAAAGTTCGTCAGTTGGAAATGGAAGCGGCAGCGAAGGCAGCAGCCTCTCAACAACATGCAGAACAACAGCAAGTTATTGAAGTTCAGCCTGCACAGCCGCCGCAACATGAAACAACGGAGCAGATTACTTGA
PROTEIN sequence
Length: 131
VTKKEIVKEISEALGMTQLKTKEIVQKTFDAIVKTLVEDGRIELRNFGVFEVKKRAARKARNPRTGDKVFVPEKFVVTFKPGKEMEEKVRQLEMEAAAKAAASQQHAEQQQVIEVQPAQPPQHETTEQIT*