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2019_SCN_bioreactor_t3_planktonic_scaffold_1553_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 2443..3822

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, transcriptional regulator, Fis family protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AC196 similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 459.0
  • Bit_score: 837
  • Evalue 3.60e-240
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EMI16237.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 457.0
  • Bit_score: 493
  • Evalue 3.10e-136
sigma-54-dependent transcriptional response regulator similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 461.0
  • Bit_score: 351
  • Evalue 2.20e-94

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Taxonomy

Rhodopirellula maiorica → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1380
ATGTCGGTGTTGCGGATCTTGATTGCTGATGACGAAGCGCCAGCTCGGTTTGCCATGCGTCGCGCATTGTCGTCGATGGCGAGCGAGATTATGGAGGCGGGAGATGGTGACGCGGCTTTAGAACTGATCAGGACCGAAGTGCCTGACCTGGTGTTTCTCGATTTGCAAATGCCCAAGCGTGGCGGTATTGAGATTTTGAAAGAGTTGGGGCACGCGACGGGTCAGTCAGAGATCATCGTCGTCACGGCCAATGACAGTGTCGCAACGGCGGTTGAATGCATTCGATTGGGGGCCTCGGACTTTATTGCGAAGCCCTACGAAGTCGAGCAAGTGCGATCAATCGCCGCACGAGTCAGGAAACGAGTCGACCTGCAACAGCGGGTGGACCATCTGCAGAATCAGCTGGACGCACAGCCTGGCTGCGGAGCGATGGTCGGAGTCAGCGGACCGATGCAGCGGCTGTTTCAACAGATGGCCAAGGCTGCCCGCTCTGACGCCGATCTGTTGATTCGAGGAGAGACCGGGACCGGGAAAGAGTTGATCGCGCGCGAGATTCATCGACTGAGCGGGAGATCCGCCGGGCCGTTCATCGCCGTGAACACCGCCGCAATTCCCGAGTCACTGACCGAGAGTGAACTGTTCGGACATGTTCGTGGGGCGTTTACCGGGGCGGATACCAACCGGACGGGTGTCTTCGAACAGGCGCATGGCGGAACCCTGTTCCTGGACGAGATTGGCGACACACCCGCAGTCGTGCAAACGAAAATGTTGCGCGTGCTGCAAGAACGTGTCATCCAGCCGGTAGGAGCGGGCAAGACGGTTGCTGTCGATGTGCGAATCATCAGTGCCACGCATCAGAACCTGGAAGAGGCGATGGCGGATGCAGGGTTCCGGCAGGATTTGTTCTATCGGTTAAAGGGTGTCGAGCTGCATGTCCCGCCGTTGCGGTCCCGCCGCGAGGATGTGCTGGTGCTGGCTAATCATTTCTTGGATCGTTGGGCGGCGAAGTCGAATGAAGCGAGACCAGACTTCAGTCCCGCAGCGATCGATGCGTTACTGGGGCATCGCTGGCCAGGAAATGTGCGAGAGCTCGAACACACGGTGCAACGTGCCGCGATGATGGCCGACCAGGCCTTGATTGATCCAGCCGACCTGGGGCTTGGATCCAGCACCGCAGTGGACGAAGAGGCACCCTTCGCAGCCTATATCGGACTGCCGCTGAGCGAGGCGAAGGCGCAGGCGATTGAATTGCTCGAACGCACACTGATCACGGCAGCTCTCGATCGAGCGGCGGGCAATGTCAGCGAAGCGGCTCGTCAGCTGGGGATGCACCGTCAAAGCCTGCAACAGAAAATGGCACAACTGGAAATCCGCCGTTGA
PROTEIN sequence
Length: 460
MSVLRILIADDEAPARFAMRRALSSMASEIMEAGDGDAALELIRTEVPDLVFLDLQMPKRGGIEILKELGHATGQSEIIVVTANDSVATAVECIRLGASDFIAKPYEVEQVRSIAARVRKRVDLQQRVDHLQNQLDAQPGCGAMVGVSGPMQRLFQQMAKAARSDADLLIRGETGTGKELIAREIHRLSGRSAGPFIAVNTAAIPESLTESELFGHVRGAFTGADTNRTGVFEQAHGGTLFLDEIGDTPAVVQTKMLRVLQERVIQPVGAGKTVAVDVRIISATHQNLEEAMADAGFRQDLFYRLKGVELHVPPLRSRREDVLVLANHFLDRWAAKSNEARPDFSPAAIDALLGHRWPGNVRELEHTVQRAAMMADQALIDPADLGLGSSTAVDEEAPFAAYIGLPLSEAKAQAIELLERTLITAALDRAAGNVSEAARQLGMHRQSLQQKMAQLEIRR*