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2019_SCN_bioreactor_t3_planktonic_scaffold_7523_4

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(4379..5428)

Top 3 Functional Annotations

Value Algorithm Source
squalene-hopene cyclase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 349.0
  • Bit_score: 323
  • Evalue 3.80e-86
squalene-hopene cyclase n=1 Tax=Schlesneria paludicola RepID=UPI00029A37C0 similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 349.0
  • Bit_score: 634
  • Evalue 4.60e-179
Squalene-hopene cyclase {ECO:0000313|EMBL:EMI27244.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 335.0
  • Bit_score: 326
  • Evalue 2.90e-86

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Taxonomy

Rhodopirellula europaea → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1050
ATGAAATCGAATGTCGTGCTGATTGCGTGTGGGGCCGTGCTTTCGATCGCGATGATCGCAAACAAGGGAGTCGGGGCTGAGGCGGTGACCTCGGTCAGCGTCGTCGATCCCGGGCCGAATCGGCGCGATGAGCCGATGGCCAGCGAGTTCTCACTCGAGAAGGCCACGTCATTTCTCGATTCGGCAGCACTTCAGTGGCAAAAAGATCGCCAGTGTTTTACGTGCCATACGAACTATGCTCATCTTTACGCGCGGCAGGCCAAGGCAGAGTCTGACACAGCGGCAAACGAAGTCCGACAGTTTGCCGAAGAATTGATCACGAAACGGTGGGTCGAGACTGGGCCCCGATGGGATGCCGAAATTGTGGCAACCGGAGCAGCACTGGCATTCAATGACGCTGCGACAACTGGCAAGTTGCACCCGATCACGCGGCAAGCCCTCGACAAGATGTGGACGGTGCAACGCGACGACGGTGGGTTCACTTGGATTAAGTGCAAATGGCCACCAATGGAGTACGACGATCACTACGGAATCACGTTGGCAGCGCTGGCTGTGGGAGTTGCCCCTGATGATTATGCTCAGACAGAAAAAGCCCAGCAGGGGATGGCGAAGCTGCGTGAGTTCTTGAAAAAGAATCCTGGGACGATGCTGCATCACCGTGCGATGGTGCTTTGGGCGTCGGCAGCCGTGACGGACTTGCTGAGCGACCAGGAAAAGCAGCAGATTGTCGACGAACTGCTTGCGTTGCAAAAGGCGGATGGAGGGTGGGGGCTCGCGACGCTGGGAGAATGGAAACGGTACAACGATGAACCGCAGGATATGGAGGTCAGCGACGGTTACGGAACCGGGTTTGTCATTTACGTCTTGCGTCGGAGCGGCATTCCAGCCGACGATCCGCGGATTCAGCGTGGCGTCAGTTGGCTGAAAAGCCATCAGCGCGCAAGCGGTCGATGGTTTACTCGATCCCTGTGGAAAGACAGCAAGCACTATCTGACGCACGCCGGAACGGCGTTCGCGGTGATGGCACTGCAAGAATGCGAGCCTCACTGA
PROTEIN sequence
Length: 350
MKSNVVLIACGAVLSIAMIANKGVGAEAVTSVSVVDPGPNRRDEPMASEFSLEKATSFLDSAALQWQKDRQCFTCHTNYAHLYARQAKAESDTAANEVRQFAEELITKRWVETGPRWDAEIVATGAALAFNDAATTGKLHPITRQALDKMWTVQRDDGGFTWIKCKWPPMEYDDHYGITLAALAVGVAPDDYAQTEKAQQGMAKLREFLKKNPGTMLHHRAMVLWASAAVTDLLSDQEKQQIVDELLALQKADGGWGLATLGEWKRYNDEPQDMEVSDGYGTGFVIYVLRRSGIPADDPRIQRGVSWLKSHQRASGRWFTRSLWKDSKHYLTHAGTAFAVMALQECEPH*