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2019_SCN_bioreactor_t3_planktonic_scaffold_7585_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(370..1890)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit n=1 Tax=Schlesneria paludicola RepID=UPI00029A9235 similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 506.0
  • Bit_score: 922
  • Evalue 9.50e-266
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 510.0
  • Bit_score: 325
  • Evalue 1.40e-86
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADB19372.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.0
  • Coverage: 510.0
  • Bit_score: 325
  • Evalue 7.20e-86

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Taxonomy

Pirellula staleyi → Pirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1521
ATGAAAAGTGACTCGTCACCTACCAAACCGCACCCTCGCAAAGGCGGGGCGCGCAGGCGAATTCTGGTCATTATGGGTGTTCTTTGTCTCTGCATTGCTGCGGGCGGCGGTGCCGTTTATTCGTTCCGTAGCGAGGGCGCCGTTCAGGCGATCACGCGCCGGCCGATCTTCGGCGAGTTTGTGAACGACATTGTAGAACGAGGCGATGTCGAGAGTTCTTCGAACACAGAGCTGCGCTGCGAAGTGTCGTCGTCGGAAGGCGTCAGAATCCTTGAACTCGTTGCAGAAGGAACACTCGTCAATCCTGGTGATGTCGTCGTGTCGCTCGATGATTCGACCATCAAGAAGGATTTGAACGCGCAGCGGATTACGGTCAATACCGTCGAGGCTGCCTACAGCAAAGCCAAGAACGAGTTAGCGGCGGCCCGGAAGGCTCGCGAAGAGTACGAGAATGGAACGTTCGTCCAGGACGAGCAGAAACTGCAAAGTGAACTGTTTGTCGCCGAGGAACAGTCTCGACGAGCCAAGGCCACATATGAATACGGTCGAAAGATGCGTGCACGTGGTTTCATCACCGATTCTCAACTCGAGGGTGAAGCGTTCTCGGTGAAGCGATACGACAAAGATCGCGATGCCGCCATGACGAAGCTGATGGTGCTGCGGGAGTACACCAAGCCGAAAACACTGATCAAACACGAATCGGATATCAAAACGAACGAGGCGGCTGAGTTCGCGGAGAAAGCCAAGTATGAGATCGAGCTGGCTAAATTGGCCAAGCTAGAAGAACAGCTCGAAAAATGCGTCATCAAGGCCACGACGACCGGTCAGGTTGTCTACAACAATCAGGATCGATGGCGTGGCGATGAATACTTCGTTCGCAAAGGCAACCGTGTTCGCGAACGGCAAGTCCTGGTCAAACTTCCTGATATCGGGCAGATGCAGGTGAAAGCCAAGATCGGCGAGGCACGTGTCGATCGCGTGAAGCCGGGGATGGAAGCCATCATTCGAGTTGAGTCGATGCGCGGCTCGGAGCTCAAAGGCGTCGTCAAGACGGTGAGTGCCTATGCCTCGGACGAGATGTGGTACAACCCGAATACCAAAGAATACGATGCGATGATTACGATCAACGACCCGCCAGCGACATTGAAACCTGGGATGACTTCACAGGTCGCCATCCGAGTCGAGACCCAGCAAGATGTGCTCCAAGTGCCGGTCCAGTCCGTCGTCGAACGAACGGGAAAGCACTATGCGATCGTGCGCGAACACGACGGAAAGCTGTCGCTACGGGAACTGTCGATTGGATCTTCGAACGAAAAGTTCATCATCGTGAAAGAAGGGCTTGGTCGAGAAGACGAAGTCGTGATGAATCCACGTCCTCATCTGGCGCGAGTCGGATTGAAGGATGCTGATGCTGGTGCCAACGGTGCAAAGACCGAGGACGAATCGAAAGACAAAACACCGTCAACGTCCAAGACGCCCGCAACCCCCGTTGCCGGTGATTCGCCCGGACGGGGCGCGTGA
PROTEIN sequence
Length: 507
MKSDSSPTKPHPRKGGARRRILVIMGVLCLCIAAGGGAVYSFRSEGAVQAITRRPIFGEFVNDIVERGDVESSSNTELRCEVSSSEGVRILELVAEGTLVNPGDVVVSLDDSTIKKDLNAQRITVNTVEAAYSKAKNELAAARKAREEYENGTFVQDEQKLQSELFVAEEQSRRAKATYEYGRKMRARGFITDSQLEGEAFSVKRYDKDRDAAMTKLMVLREYTKPKTLIKHESDIKTNEAAEFAEKAKYEIELAKLAKLEEQLEKCVIKATTTGQVVYNNQDRWRGDEYFVRKGNRVRERQVLVKLPDIGQMQVKAKIGEARVDRVKPGMEAIIRVESMRGSELKGVVKTVSAYASDEMWYNPNTKEYDAMITINDPPATLKPGMTSQVAIRVETQQDVLQVPVQSVVERTGKHYAIVREHDGKLSLRELSIGSSNEKFIIVKEGLGREDEVVMNPRPHLARVGLKDADAGANGAKTEDESKDKTPSTSKTPATPVAGDSPGRGA*