ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_7701_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(481..1059)

Top 3 Functional Annotations

Value Algorithm Source
Two component heavy metal response transcriptional regulator, winged helix family n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5TE50_9PLAN similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 188.0
  • Bit_score: 296
  • Evalue 1.60e-77
Two component heavy metal response transcriptional regulator, winged helix family {ECO:0000313|EMBL:EMI47405.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 188.0
  • Bit_score: 296
  • Evalue 2.30e-77
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 183.0
  • Bit_score: 250
  • Evalue 2.20e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopirellula sp. SWK7 → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 579
TGCCGCCTCAAGGAAGAGGCGTGGGATCTTGTGTTACTGGACTGGTGGCTGCCCGGCGAAGACGGTGTGCAGGTCCTACGACGATTTCGTCAGAACAACCGCTCGACACCTGTCCTATTCCTCACAGCGCGCGATGGCATCTCTGAACGCGTTACAGGTCTCGATGCCGGTGCCGACGATTACCTGACGAAGCCATTTGCATTTGAAGAATTGCTTGCTCGGATTCGGGCATTACTCCGTCGTCATGACCAAGCTGACGCGCTCAGTATTGAATTCGAAGATATTCGGATAGATCTGGCAAGACAACGTGCGACGCGTGCAGGGGCACCGCTCGATTTGACGACCAAGGAACTCGCGCTCCTTACGTATCTCCTTCGTAATCCCCACAAGGTGCTGACCCGTACGCGCATCTACGAATCGGTGTGGGACGAGAACTTCGACGGTTTTTCGAATACGTTAGAAGTTCACATTAAAGAGCTGCGGCGAAAACTCGAGGCGATGGGCCGACGTGTGATCTACACACGTCGGGGGATGGGCTACGTTCTTGATTCTTCCTCCAACGACGAACTGCTCGTATGA
PROTEIN sequence
Length: 193
CRLKEEAWDLVLLDWWLPGEDGVQVLRRFRQNNRSTPVLFLTARDGISERVTGLDAGADDYLTKPFAFEELLARIRALLRRHDQADALSIEFEDIRIDLARQRATRAGAPLDLTTKELALLTYLLRNPHKVLTRTRIYESVWDENFDGFSNTLEVHIKELRRKLEAMGRRVIYTRRGMGYVLDSSSNDELLV*