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2019_SCN_bioreactor_t3_planktonic_scaffold_11860_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 196..1611

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter MATE n=1 Tax=Schlesneria paludicola RepID=UPI00029B1DF4 similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 471.0
  • Bit_score: 893
  • Evalue 7.50e-257
MATE efflux family protein similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 462.0
  • Bit_score: 469
  • Evalue 5.80e-130
MATE efflux family protein {ECO:0000313|EMBL:ADG69627.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 462.0
  • Bit_score: 469
  • Evalue 2.90e-129

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1416
ATGTCGAGTGACGACTCTGCGTCCGAATCGCAGCTGGCACCGATTGGACTTCGCCGACAGCTATTTTTGTTGGCGATTCCGGTTCTCGGTGAACAGTTCCTGACATTCTGCATTGGATTTGTCGACGTTTACTTGTCCGGCCGCTTGGGAAAAAACGAAACAGCCGCCATTGGCCTGTCGGCGTATGTTTCGTGGTTGGCATCCATGATCTTTAGCCTGATCGGAACCGGCACCACGGCGGTCATCGCCCGTGAATGGGGGGCAGGCCGCTTCGACGAAGCAAGAAAAGTTGCAGGACGTTCGTTGACCATGATGCCCGTCATCGGGTTCATGGTATTCTGCTTATTGCAGGTCATGGCAAGTGGCTTCGCACGGCTGCTGAATATGGAAGGCGAGCAGTTACGGATCGCGGTACAGTTCTTACGGATCGACGCGTGCGGACAATTTTTCGCCGGATGGACACTGATCGCCGCGGCAGCGTTTCGCGGATCGGGTGACATGTGGTCGCCCTTACGTGTGCTGATCTACACGAATCTGACGAACATCGCCGTTTCAGTGGCCTGCACTTGGGGATTGCACGTCCCTGGAACTTCCACCTGGTTGATTCCTCCCCAAGGAGTGATCGGCATCGTGATCGGAACGACATCCGCGCAGTTCTGCGGGGCGACGCTGATGACTCTGCGGCTTCTCTCCAAATCGCCAAGACTCGGGTCGAAACAACTTCATCTCACCCGTAGTGATTTTGGCTTTCACCGTGAAACAATCTGGCGTGTCATCCGCGTCGGGGGGCCCGCAGCCCTTGGCGGCCTTTGCACGTTCTTCGGACACTTCTCGTTCTTGATGGTCATTGCGCGGCTTTCTGACAAAGGCTTCGACGGAGCAACCTTTGCCGCGCACATCGTGGGAATTCGGATCGAAGCCCTGTCCTATTTACCAGTTGAAGCATTCGGGATTGCCGCAGCAACATTGGTTGGACAAGCCTTGGAAGCTCATCATCCCGATCGTGCAAAACAAGTCGGCTACGAGGCGCTGCGTCAGTGCCTGTGGTATGCCGCCGTGATGAATGTGCTGTTCTTCCTGTTCGCCCCGCAAATCTACGCAAACATGCATACCGAGCATGAGGTCGCTGTCGTCGGGGTTCCCGCATTTCGCTTGATGTCGTTCTATCAGATCCCCAACGCAATTCTCATTGTGTATGTCTGTGCCCTTCGCGGCGCAGGCGATACTCGATTCCCGCTGCTCTGTTCACTCATCGGAAACGTATTTGTTCGCGTTTCGGTCGGATACTTGTGCGGCGTCTACTGGCAACAAGGATTGTGGGGGGCATGGATCGGCATGGGGGCCGACAACATCTTGCGTTCGATCCTAATCTCGTTTCGCTATGTCTCAGGAAAATGGACGCGAATTCGCGTGTAG
PROTEIN sequence
Length: 472
MSSDDSASESQLAPIGLRRQLFLLAIPVLGEQFLTFCIGFVDVYLSGRLGKNETAAIGLSAYVSWLASMIFSLIGTGTTAVIAREWGAGRFDEARKVAGRSLTMMPVIGFMVFCLLQVMASGFARLLNMEGEQLRIAVQFLRIDACGQFFAGWTLIAAAAFRGSGDMWSPLRVLIYTNLTNIAVSVACTWGLHVPGTSTWLIPPQGVIGIVIGTTSAQFCGATLMTLRLLSKSPRLGSKQLHLTRSDFGFHRETIWRVIRVGGPAALGGLCTFFGHFSFLMVIARLSDKGFDGATFAAHIVGIRIEALSYLPVEAFGIAAATLVGQALEAHHPDRAKQVGYEALRQCLWYAAVMNVLFFLFAPQIYANMHTEHEVAVVGVPAFRLMSFYQIPNAILIVYVCALRGAGDTRFPLLCSLIGNVFVRVSVGYLCGVYWQQGLWGAWIGMGADNILRSILISFRYVSGKWTRIRV*