ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_4342_14

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(13075..14487)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AFE2C similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 470.0
  • Bit_score: 894
  • Evalue 2.60e-257
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 447.0
  • Bit_score: 414
  • Evalue 2.20e-113
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ADG68386.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 447.0
  • Bit_score: 414
  • Evalue 1.10e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1413
ATGCTTGCTCGCATTATGATCGTGGTCGTTTTGTGTGTGGCAACGTCGACCGTTGCAGCGCAGCCCAATCCCGAGCACGAAAAATTGCGAGCGGAAACGAAAGCCGCCTACGAAGAGGGCGACTTTGAAGAAACGAAGGAACTGGCGAACAAGATCCTGGCACAGAATCCCAAGGATCACGTGGCAATGTATCTGCGAGCCAGCGCCAAGGTAGAACTCGGCGTCCTGAAGCACGACGTGAAAGAAATCCGCGAAGGAATTGAAGACTCGCGCGAATCGATCAAAGTTGGCGGATCTGAAATCAATTATTACCTGCCCTACCTGTATGGCATGGTCTCACTCGCCACGATCGAAGACAAGAAAGAGCACGCGAACGTCGCGTTGACCGTCGCCAAGACCGTGCTTGGCAAGCCTGCACTCACCGGCGAACAACGAGCCAATGTCCTTTACCAACGTGCTCAAGCCTATCTGTACCTCAAGGATCTCAATGCCGCGATCGCCGATTACCAGGAAGCCATCAAGAGTTTCCCCGGCCATATCGGCTCGTACATGGGACTTGCGCACTGTTTCATCATCGACGGCAAACCTGATAAGGCACTCGCCACGTTTACCTCAGCCGTCGAAACATTGCCCGACAACAAACTCGTCCACAACAACCGGGGCCTGTTCCTACAGCAGCAAGGCAAGCCGCAAGAGGCGCTCAAAGACTTCAACAAGGCGATTGCACTCGATGGTGAATTCGCCACTGCGTACACCAACCGCGGATTCACACTTCAAGGCCAGGGACAACTCACTGAAGCTGAAGCAGACTTCACAAAGGCCATCAGCCTGATGCCCGACAATCCACTCTTCGCCAGCTTGCGAGGAACATGCCGACTTTCGCAGGGGAACACCGCTGGAGCGATTGAAGATTACACGAAAGCGATCCAGTTGAACCCACAAAACCCAGTCGCTCACGCAGACTTGGGATTCGCGAAATTCTTCTCACGCGATTTCGCGGGGGCCTTCGCGGCTTTTGATGAATCCACAAAGATCGACGCCAACGTCATGCGATATCTGAGCCCCTGGAAAGCCTGGTCTCTGGTGCTCTCGGGCCGACCAGAAGCCGTTGCGGAATTGGCAGAAGTCAGTGCCAGCAAAGCCGACAAGGATCGAGACTGGATCGACGAACAGGTCCTATTCCTGAATGGCAAGATCTCCGAGAAGGAACTGGTCGAGTTCGTCAACAAGACGACGGATGCCAAACTGAAGAGCGCGCAAATGTGCGAGGCCTACTACTTCATCGCCGAGCGACGCCTTCAAGCAAACGACAAGACGAACGTCCGCTTCTACGAAGAGGTCCTGAAGACGAAAGAAACGCAACTGTCCGCCTACCGTGGCGCTCAGTTCGCACTCAAATCTTTCAGCAAATAG
PROTEIN sequence
Length: 471
MLARIMIVVVLCVATSTVAAQPNPEHEKLRAETKAAYEEGDFEETKELANKILAQNPKDHVAMYLRASAKVELGVLKHDVKEIREGIEDSRESIKVGGSEINYYLPYLYGMVSLATIEDKKEHANVALTVAKTVLGKPALTGEQRANVLYQRAQAYLYLKDLNAAIADYQEAIKSFPGHIGSYMGLAHCFIIDGKPDKALATFTSAVETLPDNKLVHNNRGLFLQQQGKPQEALKDFNKAIALDGEFATAYTNRGFTLQGQGQLTEAEADFTKAISLMPDNPLFASLRGTCRLSQGNTAGAIEDYTKAIQLNPQNPVAHADLGFAKFFSRDFAGAFAAFDESTKIDANVMRYLSPWKAWSLVLSGRPEAVAELAEVSASKADKDRDWIDEQVLFLNGKISEKELVEFVNKTTDAKLKSAQMCEAYYFIAERRLQANDKTNVRFYEEVLKTKETQLSAYRGAQFALKSFSK*