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2019_SCN_bioreactor_t3_planktonic_scaffold_11070_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 1556..2005

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 n=1 Tax=Schlesneria paludicola RepID=UPI00029AB0FB similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 149.0
  • Bit_score: 264
  • Evalue 5.40e-68
Uncharacterized protein {ECO:0000313|EMBL:EDL61787.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 147.0
  • Bit_score: 152
  • Evalue 4.20e-34
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 153.0
  • Bit_score: 147
  • Evalue 2.70e-33

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Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 450
GTGAAGCTAACTGCCGCAGACATCGATGATCTTTCTGCCGAGATTTTTCTGGCAATTCTGGCCGATCAATTCGCCGTCTTGAAGCACTTTCGTGGCGAATGTTCGCTGGCGACATATCTGACTGTGATCGCCCGCCGCGTTGTCGTGCGCGAGATCATCCATCGCCGCCTGTCAGAAGCGTTGGGACATGTGAAATCACATAATTCTCACATCCCGCAGTCAAAGACTGACAATCAAGACATGGTCCGTATCGAAAACCAAGAACTGATCCAACAAATGTTGGCTGGCCTGTCTGAGCAAGACGCTAGCATCGTGCGACAGTTTCACCTCGAGGGTAAGACCTATCGTGAGATTGGCGAGGATTTGGGCGTGCCCGAAAACTCAATTGGACCGACGCTATCCCGCGCTCGCGAAAAGCTGCGACAATCATTGTCCGCGAGCATGGGTTAG
PROTEIN sequence
Length: 150
VKLTAADIDDLSAEIFLAILADQFAVLKHFRGECSLATYLTVIARRVVVREIIHRRLSEALGHVKSHNSHIPQSKTDNQDMVRIENQELIQQMLAGLSEQDASIVRQFHLEGKTYREIGEDLGVPENSIGPTLSRAREKLRQSLSASMG*