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2019_SCN_bioreactor_t3_planktonic_scaffold_3542_7

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(6020..7414)

Top 3 Functional Annotations

Value Algorithm Source
mechanosensitive ion channel MscS n=1 Tax=Schlesneria paludicola RepID=UPI00029B0A2B similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 464.0
  • Bit_score: 897
  • Evalue 3.00e-258
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 480.0
  • Bit_score: 401
  • Evalue 1.90e-109
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ADG69117.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 480.0
  • Bit_score: 401
  • Evalue 9.40e-109

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1395
GCGCCAATCATCGCGATTGGAGCGTGCCTGGGATTATTGACCCTGGGTATCACGGGCTACTTCTACACCGCGTTGCAGCTGACGTGGCGTATGCAGCAAACCGCCTGGTTTGTCGTGGGGTTGATTCTTGTACGCTCAGTCATCCGCCGATGGATTGCCCTGGAACGCCGACGCATGGCCGTCCTTCAGGAAGAAGAACTCCAGTCGCTGACCAAGGCCAGTCACGAGCCAGGCAACGCAGGGCACAATGCATTCTTGTTTCCACGTTGGAACTGGCCAGACTTCCGTCTAAACCTGACACAAATCGTCAATCAGATGCGACGACTGCTGGACACTGGCCTGATCACTCTCGCGGTGATCGGGATGTGGATCGTCTGGTCAGATGTCACGCCTGCTCTTAACATTTTTGATCGCGTCACACTTTGGCAAACCACGATTCAGGAAACACGATCAGTCAAGGATCCCAAAGATCCAGAGCTGCCCCCAGTAACGCAGACGGTGCAACGACTTAAGCCTGTCACTGCCGCAGACCTGGGCCTGGCCGCCTTGATCGTTGCGATCGCCGTGATTGCCGGGCGAAACATCCCCGGTTTGGTCGAAGTGATTTTGCTGGAACACCTTTCCGTCGACGCCGGTATCCGCTTCGCCGCGACTTGCCTGGTGCGGTATGCCATCTTCATTACGGGAGTCTCGTGTGCATTTGCCCAAATCAGCATTGGGTGGAGCAACGTTCAGTGGCTCGTCGCAGCCGCATCGGTGGGTCTTGGCTTTGGACTTCAAGAGATCTTCGGCAACTTTGTGTCGGGCATCATCCTGCTCTTTGAACGTCCAATGCGTGTTGGCGACGTCATTACAATCAGTGACACCACAGGAACCGTCTCACGGATCCGTTTCCGCGCAACCACCATCGTGGATGGCGACCGCAAAGAGTTGATCGTCCCCAATAAGGAATTCATCACGGGTCGGTTGCTGAACTGGACGCTCAGCGATCGCGTGAATCGTGTCGGCGTGAAAGTGGTCGTCTCACAGGACTGCGATCCGCAGCGAGTCCGGCGTCTGCTACTGGATATCGCTTCGCAGCAACCGCAATTGCTGAAGGACCCTGCCCCGTCAGCGGCTCTGGAAGACCTCAACGGTGGCCTGACGTTCACCGTGCGTGGTTTCTTGCCGTCACTCGAAGGTCGTGCGACCACGATTCACGAGCTGTGCACGACGATTCATGCACGTTTCAAGGCAGAAGGAATTGAAATGTCATGGCCGACCAGTGAAGTCTACGTCCATCTTGAGCCGCACGAGGCGCATCAGCCAATTCCATCTGGCCCTCATCAACAACCAAGCGGGGCACCTCTCAAGCCAATGCAGCCCGACTTCAGTAGTGCATTTCGCCGCGCCTGA
PROTEIN sequence
Length: 465
APIIAIGACLGLLTLGITGYFYTALQLTWRMQQTAWFVVGLILVRSVIRRWIALERRRMAVLQEEELQSLTKASHEPGNAGHNAFLFPRWNWPDFRLNLTQIVNQMRRLLDTGLITLAVIGMWIVWSDVTPALNIFDRVTLWQTTIQETRSVKDPKDPELPPVTQTVQRLKPVTAADLGLAALIVAIAVIAGRNIPGLVEVILLEHLSVDAGIRFAATCLVRYAIFITGVSCAFAQISIGWSNVQWLVAAASVGLGFGLQEIFGNFVSGIILLFERPMRVGDVITISDTTGTVSRIRFRATTIVDGDRKELIVPNKEFITGRLLNWTLSDRVNRVGVKVVVSQDCDPQRVRRLLLDIASQQPQLLKDPAPSAALEDLNGGLTFTVRGFLPSLEGRATTIHELCTTIHARFKAEGIEMSWPTSEVYVHLEPHEAHQPIPSGPHQQPSGAPLKPMQPDFSSAFRRA*