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2019_SCN_bioreactor_t3_planktonic_scaffold_29609_6

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(3874..4593)

Top 3 Functional Annotations

Value Algorithm Source
flagellar biosynthesis sigma factor n=1 Tax=Schlesneria paludicola RepID=UPI00029A01F5 similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 239.0
  • Bit_score: 444
  • Evalue 6.10e-122
RNA polymerase sigma factor for flagellar operon FliA {ECO:0000313|EMBL:BAL53941.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 259.0
  • Bit_score: 201
  • Evalue 1.30e-48
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 258.0
  • Bit_score: 160
  • Evalue 3.80e-37

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Taxonomy

uncultured planctomycete → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 720
ATGTCAGTCAGTATCAGCCAGCATTTGAAGGAATATTCTCGTACGGCAGAGCAGACGACTCGTGATGCCCTGGTCATGAATCATCTCTGGCTCGTTCGCCATTTGACGGGAAAGGTCACTGCGCGCCTGCCGATGGGTGTTGACGTCGAGAATTTGGAATCGGCTGGCATGCTTGGTCTTGTCGAAGCGGCTCGACGCTATGACGCCTCGCGCGGGGTCGATTTCAAATCTTTTGCTGCGCTACGTATTCGCGGGGCGATTTACGATGAAGCACGCCGCAATTGCCCGTTGCCTCAAGAAGTCATGCAACGAGTCATGTTGGTTTCGAAGGCGCAAGAGCAGTTGACCTCGCCAATCTCGGTTGATGATCTGGTGGCTGAAACGGGACTTGCGAAGGACGAGGTGATTGACGCCTTGTTGGCGATGCCCCTGATTCGCGTCCAATCTCTGGATCACGTCTTGGACGATCCAACTCGACATTCTGATTCGTCACCCGATGCTTCTGCCGAGTTTGCTGAGCAGAAACGATTGCTGGCTGACGCGATTGCCGCGCTTCCTGAACGCGAACGCTTGGTCGTGACCCTGTATTACATGGAAGACCTGCGACTTAAGGAAATCGGCGAAGTGCTGAAGCTTTCGGAATCGCGAGTGTCTCGTTTGCTTGCCGCCGCACAGCTTCAATTGCGGTCGTATGTCGGAACGAACAGGAAGGATGCGTGA
PROTEIN sequence
Length: 240
MSVSISQHLKEYSRTAEQTTRDALVMNHLWLVRHLTGKVTARLPMGVDVENLESAGMLGLVEAARRYDASRGVDFKSFAALRIRGAIYDEARRNCPLPQEVMQRVMLVSKAQEQLTSPISVDDLVAETGLAKDEVIDALLAMPLIRVQSLDHVLDDPTRHSDSSPDASAEFAEQKRLLADAIAALPERERLVVTLYYMEDLRLKEIGEVLKLSESRVSRLLAAAQLQLRSYVGTNRKDA*