ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_30893_13

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(11304..12665)

Top 3 Functional Annotations

Value Algorithm Source
pectate lyase n=1 Tax=Schlesneria paludicola RepID=UPI00029A3AF3 similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 453.0
  • Bit_score: 821
  • Evalue 3.50e-235
Pectate lyase {ECO:0000313|EMBL:EPR66264.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 432.0
  • Bit_score: 460
  • Evalue 1.70e-126
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 459.0
  • Bit_score: 330
  • Evalue 4.00e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cyclobacterium qasimii → Cyclobacterium → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1362
ATGAAACGTGTGACTGGATCATTTCTGACGAGCTTGGCTGGATCACTTCTGCTCGCGGCAGCTTCAATAGGCTTCGCTGACGACGCTCAAATTGCCTTCCCTGGTGCAGAGGGTGCTGGACGATTCGCCAAAGGTGGTCGCGGGGGTGACGTTTACCACGTCCTAAATCTTAACGACAGCGGCCCGGGCTCTCTGCGTGAAGGAGTCCTCTCTGCAAGTGGACCACGCACGATCGTATTCGACCTTTCAGGCACGATCGAGCTGAAGTCACCACTAACGATCAAGAAGTCGTTTCTGACAATCGCCGGTCAATCGGCACCTGGAGACGGCATCTGCTTGAAAGACCAAACCTTCGGTATTCAAGGTGCTTCGCACATCATCGTGCGCTATCTGAGAATTCGTCTGGGCGACCAAAACAAGTCCGAGAAGTCAGGTGGAATCGATGGGATGACCACGAATGATGTCGACCATGTCATCTTCGACCACCTGACAAGCACCTGGGGTATCGATGGGAACCATGATCTGCGTCGCGGCGGAAATTTTACACTGCAGTGGTCAATTTATGCGGAAGCACTCAACCATAGCCTGCATTCAAAGGGCGGGCATGCGATGCTCGCATCGTTCCGCGATTTGACCGACAACATCACGCTGCATCACAATCTGTTCGCCAGCAGTCGCGAACGCCATCCTACCTTAGGTGGCAGCCCACGCACTCGTCCCGACACCGTCGCAGATTTTCGCAATAACGTCGTCTACAACTTGTCCGGGGCGACAAACTTCGGAAACTGCCGGATCAATGCCATTAACAACTTCTATCGCTCGGGACCGAACACCCCCGCCGGAAATCATCCGCTCGCAACGAAGACGGAAAACAAGGACGCGTTAAAAGTCTTCCTGAAAGGAAATGTGTTTGAGGATAGTCCCGAATTCACGCGCGATAACTGGCTCGCCGTCGATGTGGACCGTTGGAAAACCAAGAATTACTTGGCAGTTTCGATCCCCCAAATCCGAGTCGACACGGAATTCAGTATTGGCAATGCGGCTCCTGAAACCGATGCATCTGACGTCGCGTTTGAAAAAGTCTTGAAATCTGCCGGGGCATCTCGGCGCCGCGACGCGGCCGACCTTCGATTGGTGGACGGAGTCATCCAGCGAACGAATCATCTCATCGATTCACAAAGTGAAGTCGGAGGCTGGCCGATTTTGAAAAGTGAACCAGCCCCACAAGACACCGATCGCGACGGGATGCCCGACGACTGGGAAACGCAACAAGGCCTAAATCCGAATGATCCAGCCGATCGCAATGGAGTCAAAGCCAACGCAGGCTACACGAACCTTGAAGTCTATTTGAATAGCCTGTGA
PROTEIN sequence
Length: 454
MKRVTGSFLTSLAGSLLLAAASIGFADDAQIAFPGAEGAGRFAKGGRGGDVYHVLNLNDSGPGSLREGVLSASGPRTIVFDLSGTIELKSPLTIKKSFLTIAGQSAPGDGICLKDQTFGIQGASHIIVRYLRIRLGDQNKSEKSGGIDGMTTNDVDHVIFDHLTSTWGIDGNHDLRRGGNFTLQWSIYAEALNHSLHSKGGHAMLASFRDLTDNITLHHNLFASSRERHPTLGGSPRTRPDTVADFRNNVVYNLSGATNFGNCRINAINNFYRSGPNTPAGNHPLATKTENKDALKVFLKGNVFEDSPEFTRDNWLAVDVDRWKTKNYLAVSIPQIRVDTEFSIGNAAPETDASDVAFEKVLKSAGASRRRDAADLRLVDGVIQRTNHLIDSQSEVGGWPILKSEPAPQDTDRDGMPDDWETQQGLNPNDPADRNGVKANAGYTNLEVYLNSL*