ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_31164_4

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(2498..2839)

Top 3 Functional Annotations

Value Algorithm Source
secretion system protein E n=1 Tax=Schlesneria paludicola RepID=UPI00029AE8AA similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 94.0
  • Bit_score: 177
  • Evalue 6.60e-42
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 89.0
  • Bit_score: 65
  • Evalue 6.00e-09
Type II secretion system protein E {ECO:0000313|EMBL:ADG65935.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 89.0
  • Bit_score: 65
  • Evalue 3.00e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 342
ATGGAAATGAATACTGCTCAAGCGGCCCACTCTATGCGAATTTCCTCAGTATTCTCGGTTCTTTACATCATCGTGATGATGTTTAGCTTGGTCCTGACAGAGGCTCGTACAGCGAGCGCCCAGGGGCCAGCGGTCGCCGCCGCACGGAACGGAAACAGTTTTCCTCCGGTTCCGGGGCCGTTCTATCGTGGAAATCACCCACAAGACCCGCGTCATGTCGGCTTTTATTTCCATTCGATGAAATTGGCCTATCTGATCGGCTTGTTCGTGTTGTGGGTCTGGACGGCGGAATGGATCGACACCGATTCTCGAGAATGCGTTTGCTGTCGCGATTGGGGATGA
PROTEIN sequence
Length: 114
MEMNTAQAAHSMRISSVFSVLYIIVMMFSLVLTEARTASAQGPAVAAARNGNSFPPVPGPFYRGNHPQDPRHVGFYFHSMKLAYLIGLFVLWVWTAEWIDTDSRECVCCRDWG*