ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_39440_4

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 4205..5938

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Schlesneria paludicola RepID=UPI00029B4CD0 similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 578.0
  • Bit_score: 1070
  • Evalue 0.0
exporter of the RND superfamily protein-like protein similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 581.0
  • Bit_score: 652
  • Evalue 5.90e-185
Exporter of the RND superfamily protein-like protein {ECO:0000313|EMBL:ADG66864.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 581.0
  • Bit_score: 652
  • Evalue 2.90e-184

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1734
ATGATTTCGCACTTCTATCGACGATATAGCGTCACAATACTCTGGCTCGTAGGCCTGTCGTTCCCCTGGCTTTGGTACCAGTCGGAACAGATGCGTTCTAATAACGACATCGAAACCTGGCTGCCACGCGACACGCCAGTGCGACAGCTGTACGAGGAATTCAAACAAGACTTCGGTGCTGAAGAAGTCATTGTCATTGGATTGCCGCAAAAGCTGGCGACGGCCAAATTGGTCGAAGCCTTTGCGGGACGACTCGAACGACTGCCAGGAATTCGCAATTGCTGGACTCCCGATCGCATGATCGCCCGCATGAACGAATTCGGTGTCGAGAACACCACGGCGCGAGAACGCTTGAACGGCTTGTTGACATCGCAATCAGGTGACTTGATTGGCGTCGTGTGCATGCTCTCAGATTCGGGCGTCAAAGACCGCGCCAAGGTCGTTGAAGACGTGAAAGAGAGTTTGACCTATTGCCAATTCCCACTCGAATCGGTCGCCCTCACCGGTGCACCTGTGATTGTGACGGAACTCGATCGCTTGGGCAGCCAGAAATCCAGCCGACAGTTCTTTCTGTTGACCTGCGGGATCAGCCTGTGCCTGTTGTACTATTCATTCGGACATCTGGGACTGTCACTGGCGACGCTGGGCACCGCACTGTGGGGGATCTTCCTCAATCAGTCGATTATGATGGTGTTCGGCGGCGAGATGAACTTCATCATGGGGTCGCTCGCGATCATGGTGATGATTTTCACACTCTCCATCTCGGTACACGTGGTCAGTTACTACGACAGTGCGCGGAAACAGGGGCACCTCGAGCCACTTGCTGCTGCGGTGATGGAATCATTCAGCCCCTGCATGTTGTCGACACTCACGACACTGCTTGGCTTGATCTCGTTGAACGTCAGTTCGATTCTTCCGGTGAGCCAATTCGGTTATGCCGCCGCATGCGGTTCGATTGTGGCACTGTTGGTGGGTTTGGGTGTGACCCCTGCCCTGTTGACGGTGTTACCAAACTGCAGCGTCAGCTCAACACGCTTCCACCTCGACTTCCGCAAATGGGGTATGGCCGTCTCGGCCAATCGCTTGCGAATCCTGACGAGTGCAGCCGTGTTGCTGGCGATTACCGCAGTGGGAATTCTGCAGCTGAAACCCAGCATCAATCCGACCGAGTTCCTGCCAAAGAAGAGCAAGATCCTGGCAGACTTGAATCGTATTCAAGACGATTTGACGAACATCGATTCGATTGAAGCAGTGGTCGATCTTGGCGAAGACAAGCTGGCGTTCGTTGATCAACTTCAGAAGGTACGCGCCATCGAAGCGAAAATCGCGGCGCATCCTGGCGTTCGTCATACCATGTCGCTGGCCACGTTCTTCCCAGAAGAAATGCCGGACAATACCCGCGCGGCAGCACGGATCTTGAATCTCGCGAACTCGTACTCGGGTGATGAGGGGCTTGTTGCTGGCCGCCAGCGACTCTGGAGAATCTCGGCCCGAATCCGCCATGACATCCAACAAAGTCCGGTCGAGGTCCTGAATGATTTGACAGACAAACTTGCGGACGAACCGATTCAGTTCACGGGGCTGACCCCGCTGCTGAAGAATGCTCAACAACAAATCTTCGACGGTTTCTGGCAGAGCTTCACCGCCGCAGTACTGACGATTTCGCTGGTGATGGTGTTGGCGCTGCGATCGATTACCGCCGCAGTCATCGCCATGATTCCAAACATCATTCCG
PROTEIN sequence
Length: 578
MISHFYRRYSVTILWLVGLSFPWLWYQSEQMRSNNDIETWLPRDTPVRQLYEEFKQDFGAEEVIVIGLPQKLATAKLVEAFAGRLERLPGIRNCWTPDRMIARMNEFGVENTTARERLNGLLTSQSGDLIGVVCMLSDSGVKDRAKVVEDVKESLTYCQFPLESVALTGAPVIVTELDRLGSQKSSRQFFLLTCGISLCLLYYSFGHLGLSLATLGTALWGIFLNQSIMMVFGGEMNFIMGSLAIMVMIFTLSISVHVVSYYDSARKQGHLEPLAAAVMESFSPCMLSTLTTLLGLISLNVSSILPVSQFGYAAACGSIVALLVGLGVTPALLTVLPNCSVSSTRFHLDFRKWGMAVSANRLRILTSAAVLLAITAVGILQLKPSINPTEFLPKKSKILADLNRIQDDLTNIDSIEAVVDLGEDKLAFVDQLQKVRAIEAKIAAHPGVRHTMSLATFFPEEMPDNTRAAARILNLANSYSGDEGLVAGRQRLWRISARIRHDIQQSPVEVLNDLTDKLADEPIQFTGLTPLLKNAQQQIFDGFWQSFTAAVLTISLVMVLALRSITAAVIAMIPNIIP