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2019_SCN_bioreactor_t3_planktonic_scaffold_43897_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(2..508)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Schlesneria paludicola RepID=UPI00029A1285 similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 169.0
  • Bit_score: 305
  • Evalue 1.80e-80
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 146.0
  • Bit_score: 142
  • Evalue 7.60e-32
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGA31245.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 146.0
  • Bit_score: 142
  • Evalue 3.80e-31

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 507
ATGTCGGTCGTTCGATTTCCTCGTGTCGAATTGCAGGATTTCAGGTTGAATTCACAAACGACTGCCTGGAACCAAGCGAGCAGATCGTGGGCCACACTGCTCACCATTTTTCTCACCGGCTGTGGTCACGCCAATGTGTATCATGAGCCGCCTCCGCCCGAAGTTGTGATTACCAAGCCGGTTCAGCGATCGGTGACAAGTTATCTGACGCAAACGGGAACCGCTCAAGCGTCGGAACGTGTCGAGCTTCGAGCACGCGTCAAAGGATTTCTTTCACAGCGTGCGTTTCATGATGGCGAAGCGGTCAAAGTTGGACAGCTGTTGTTCGTGATCGACGAAGAACCGTTTCGTACACGACTTGCCCAGCTGAATGCCAAAGTGGCCGAGGCTGAATCGGCTCTGACGAAGGCCGAACAATCAAAACTTCGCGAAATTAACCGTGCGAAGCTGGACCTGGATCAAGCCGATCTCGAATTAGCCAAACTGTCCGACGCCCGCGTTCGCAGT
PROTEIN sequence
Length: 169
MSVVRFPRVELQDFRLNSQTTAWNQASRSWATLLTIFLTGCGHANVYHEPPPPEVVITKPVQRSVTSYLTQTGTAQASERVELRARVKGFLSQRAFHDGEAVKVGQLLFVIDEEPFRTRLAQLNAKVAEAESALTKAEQSKLREINRAKLDLDQADLELAKLSDARVRS