ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_64702_4

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 2200..2709

Top 3 Functional Annotations

Value Algorithm Source
single-stranded DNA-binding protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AC278 similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 169.0
  • Bit_score: 328
  • Evalue 3.40e-87
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 171.0
  • Bit_score: 229
  • Evalue 2.30e-57
single-strand binding protein similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 173.0
  • Bit_score: 215
  • Evalue 7.00e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 510
ATGGCAAGCTTCAATAAAGTCATTCTGGTTGGCAATTTGACGCGTGACCCCCAAGTGAAATACACGACGGGGGGAACTGCCGTGACCGAACTCGGTTTGGCCGTCAATCGCCGCTGGCAGGACAAGCAGTCCAATCAATGGAAGGACGAAACGACATTCGTCGACGTCACGCTTTGGGGCCGCACTGCAGAGATTGCTGGTGAATACCTGGCGAAGGGCCGCTCGGTTCTGATCGAAGGACGTCTGCAACTTGATACGTGGGATGACCGCGAATCAGGGCAGAAACGCAGCAAGCTGCGGGTCGTCGGCGAGAATATGACGATGCTCGGCGGAAAAGGCGATGGTCCGCAGGGTGGTGGTGGCGGTGGAGGCAATTCGGGCGGTCGCCCAATGAGCTCCAATGCTCCGCGTGGTGGTTCGTCTGGTGGTGATTCCTACTCGTCCGAGTCTCACGGCGATTCGTCGGGATTTGATGATCACTCGGGTGATAGTGACGATGTACCTTTCTAG
PROTEIN sequence
Length: 170
MASFNKVILVGNLTRDPQVKYTTGGTAVTELGLAVNRRWQDKQSNQWKDETTFVDVTLWGRTAEIAGEYLAKGRSVLIEGRLQLDTWDDRESGQKRSKLRVVGENMTMLGGKGDGPQGGGGGGGNSGGRPMSSNAPRGGSSGGDSYSSESHGDSSGFDDHSGDSDDVPF*