ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_80456_6

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(5673..7469)

Top 3 Functional Annotations

Value Algorithm Source
RDD domain-containing protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AA5A3 similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 596.0
  • Bit_score: 980
  • Evalue 4.50e-283
RDD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 30.0
  • Coverage: 200.0
  • Bit_score: 94
  • Evalue 8.40e-17
RDD domain containing protein {ECO:0000313|EMBL:ADG70048.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.0
  • Coverage: 200.0
  • Bit_score: 94
  • Evalue 4.10e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1797
ATGTCCTGTTACAAACGCGGGTATTTGGTCGGCCTGTTCCTGATTGCGGCGATTTTTTGCGGTCCGCAAGTCGCATTCATCTACTCAGCTGCGATCGAGTATTTCCAGTCGCGCAGTCTTCCCGTGCATTCGATACCGGGGTTTAGTCGCATACCGATATCACACAAAAGTGAATTGATTCAAGCGGCGTTTTCGCAAAACCGGTTTGTCGTTCTGGAGAACAAACTCATAGACTCTCAAACACGGCTTTTGACTCTCAAAACATTCGATCCGCAATCAGGAACGACGGCCCAGCAACTTGATCTTTCGGCAACATGTGAATACGTCGCCACCTCGTTTGAAGACCGCCTGTGGATCTTACCCAGCGATTCGAATGCCCCGTCATACGAACTGATTGATGGTGTCGCTCACCAATCAGATGTCCCCAAGTTCAACACTCACCTGGATCAAGGAACGAGATTCTTGATCGACGGGGAACCGGCCTATGTCAGTCCAGATTTAAAAGACTTGGCCGTGTTCACACCGCGCCGGGAAAGACACATTTGGATGCCGACGAAGACCATCGATCTTCCGGATTTAAGTTGCGACTGGCTGTACGGCGACACCATTGTGCATTTTCGTGGCGATCTTCCCGACATCTCACTCATCCACCGCGGCGATCAATCCCACATTTTTCTTAGCATGAATGGATACGTTCTCTACCGTCCAGGAATCGAATTCAATCCCAATGGGTCTTCGCTTCACCAAAACTCCGGTCGGCTCCGAGTGACGTGGCCACGGAACGTTGGCTCAAATGGAGTTGGAAACTCCGCTGGCGACGATCCTCAACTGGCTAAATGGTCGCTTGTATGCGATCGCCCGGCGGTCGTTTCAGAAATCACAATGCATTCCAGTCGGCAACTGGCGAAAGGTGCGATGCTGATTGAAGGACAGCCTGCGATATTGATTATTGAAGAAGTTCAACCGAAAGAGTCGACTGGTACGATTCATCGATTTGATGGAACAAACTGGTCGCCTTGGGAGACTCTGTCACTCCCCTTTGCCGTGTGCGACTTTCGCACCGCCACGCGTTCCGATGGGCAAAGCTCGTATCTCGTCGTTGCCACGCCCCTGGGTGAAACGTTCGTTTACCTCCTTGATGCGGTAGGAATTCAATCCCTGCAACCAAACTTGCCTCATCCGTCGCTCAAAACGCAGATCAATCTCTCATTTCTATTCATCGTTTTCGTCGCGAGCAGTATCCTGTGCGCGTTCGGTGCCTGGTTACTGATGAGGTGCTATACAACACCAGAGTATGCCTTCGGGCAAGAAATCGTCACGTTGGCATCACTCGCCCAACGTGGCCTGGCACGAATGATCGACATCGGGTTCATTGCGACGAGTGCCCTGATCGTAGGCGGAATTCTCACTTGGGGACTGGACTGGCCCGCCTTTCGGGAAGCCATCAACTTAAATGTCGCTCATCCGTCAATTCCGATCGTCCGACACGCGGTTGAGATGACTGTGATCTGGATCGTTTTCGCAGTACTCGTTTTTCTCGTCATCCAGGGCACAACGGGGTGCACGCCTGGGAAGCGATGTTGCGGAATCAAAACTGTGCGTTCAACGCTACGTCCCTGCGGCATCGCTCGCAGCCTAACTCGCGAAATCATTTTCTATGTCGACTCGTGCAGTCTGCTCTGCTGGATCCCTGGTATTTTGAGCATCGCACTGACGCCTCTTCGACAGCGTCTGGGCGATCTCGTCTCCGATACGATCGTCGTGAATGATTTCACACGGAACCGCGAAACCTCCTGA
PROTEIN sequence
Length: 599
MSCYKRGYLVGLFLIAAIFCGPQVAFIYSAAIEYFQSRSLPVHSIPGFSRIPISHKSELIQAAFSQNRFVVLENKLIDSQTRLLTLKTFDPQSGTTAQQLDLSATCEYVATSFEDRLWILPSDSNAPSYELIDGVAHQSDVPKFNTHLDQGTRFLIDGEPAYVSPDLKDLAVFTPRRERHIWMPTKTIDLPDLSCDWLYGDTIVHFRGDLPDISLIHRGDQSHIFLSMNGYVLYRPGIEFNPNGSSLHQNSGRLRVTWPRNVGSNGVGNSAGDDPQLAKWSLVCDRPAVVSEITMHSSRQLAKGAMLIEGQPAILIIEEVQPKESTGTIHRFDGTNWSPWETLSLPFAVCDFRTATRSDGQSSYLVVATPLGETFVYLLDAVGIQSLQPNLPHPSLKTQINLSFLFIVFVASSILCAFGAWLLMRCYTTPEYAFGQEIVTLASLAQRGLARMIDIGFIATSALIVGGILTWGLDWPAFREAINLNVAHPSIPIVRHAVEMTVIWIVFAVLVFLVIQGTTGCTPGKRCCGIKTVRSTLRPCGIARSLTREIIFYVDSCSLLCWIPGILSIALTPLRQRLGDLVSDTIVVNDFTRNRETS*