ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_111946_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 1186..1986

Top 3 Functional Annotations

Value Algorithm Source
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate carboxylase n=1 Tax=Schlesneria paludicola RepID=UPI00029B5536 similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 261.0
  • Bit_score: 459
  • Evalue 1.20e-126
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 248.0
  • Bit_score: 260
  • Evalue 3.90e-67
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase {ECO:0000313|EMBL:ADG65914.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 248.0
  • Bit_score: 260
  • Evalue 1.90e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 801
ATGCTTCAAGATTCTCTCGCTCAACTTCTTCAACAGTGGCAGGCTGGCGAGCTCGCGGCCGACCGTCTCGAGCACGAACTACGCTCGGCTTTGGCGGTGACCTCGTCCACTCCCGAAGTACGTGTCGACCTGGACCGCCAGCGGCGTTGTGGATTTCCTGAAGTGGTCTATGCACCCGGAAAAACCGTCGACGCCATTCGAGGTGTGTTCCACGAACAACTCATCGTCGGACAAAACTCTCTGGCCACCCGGGTGACACCCGAACAGGCGGCCGCGGTTCAAGTCGATTTTCCTGCGTCCGTTTTCAATCCAGTCGCACGAACGTTAGTTCAGCTCAATCAGTCCGCTCCCCCCAACGGTCGAGTCATCGTCGTGTCGGCCGGTACAAGTGATCGTCCCATCGCTGAGGAGGCTTTCGAAACTGTTCGCTGGATGAACTGTCAGACGGAACTCATCCTGGATGTGGGCGTCGCGGGACCACAGCGTTTGCTGGCCCAAACCGAACGTCTTGCGACGGCCGACGCAGTGGTCGTCGTGGCCGGCATGGAAGGAGCACTGCCGTCCGTGGTGGCAGGCTGGGTCGCGGTTCCCGTAGTCGCCGTCCCAACAAGTGTCGGATATGGAGCCCATCTGAATGGTTTCGCGCCTTTGCTGGGAATGCTGACAAGTTGTGCGGCGAACGTGGCAGTGGTCAACATCGACGCCGGATTTAAAGGCGGCTATCTTGCGGGTTTGATTGCCCGTCAAACTCGACATCCAACGGCATCCTCGCCGGAAGGTTCATCATGGCAGAAATCCTGA
PROTEIN sequence
Length: 267
MLQDSLAQLLQQWQAGELAADRLEHELRSALAVTSSTPEVRVDLDRQRRCGFPEVVYAPGKTVDAIRGVFHEQLIVGQNSLATRVTPEQAAAVQVDFPASVFNPVARTLVQLNQSAPPNGRVIVVSAGTSDRPIAEEAFETVRWMNCQTELILDVGVAGPQRLLAQTERLATADAVVVVAGMEGALPSVVAGWVAVPVVAVPTSVGYGAHLNGFAPLLGMLTSCAANVAVVNIDAGFKGGYLAGLIARQTRHPTASSPEGSSWQKS*