ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_118351_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(1052..1204)

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00021618}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 45.0
  • Bit_score: 58
  • Evalue 2.80e-06
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Schlesneria paludicola RepID=UPI00029A62D4 similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 50.0
  • Bit_score: 95
  • Evalue 1.10e-17
deoxyxylulose-5-phosphate synthase similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 45.0
  • Bit_score: 58
  • Evalue 5.60e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 153
GTCAGCACCGCCAATTTGAAGGTGCTCGGAATTCCCGATCAGTTTATTGAGCACGGCGAACGTGACGAATTGCTGGCAGACATTGGTCTGGATGTCGAGAGTTTGATGGCAACCGCCGTTGCCATGTCCGATCGGGGCACTCTGGTCGAGTAG
PROTEIN sequence
Length: 51
VSTANLKVLGIPDQFIEHGERDELLADIGLDVESLMATAVAMSDRGTLVE*