ggKbase | organisms

Consensus taxonomy: Chloroflexi → Bacteria

Metagenomic Context

Parent: BJP_IG2599_UNK

Properties

Avg. coverage: 10.95 Longest contig: 34.92 Kbp Bin length: 1.82 Mbp GC content: 59.36 %

Contigs count: 392 Features count: 2039 rRNAs count: 0 tRNAs count: 28

Genome completeness

partial RP 42 / 55 MC: 2 BSCG 40 / 51 ASCG 10 / 38 MC: 2

Displaying items 51-100 of 392 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
bjp_ig2599_scaffold_42128 Species: RBG_16_Aminicenantes_63_16_curated (50%)	2	1479 bp	61.05	7.71	90.67
bjp_ig2599_scaffold_29829 Species: CG_Anaero_02 (50%)	2	1928 bp	58.87	7.62	87.45
bjp_ig2599_scaffold_25630 Species: BJP_IG2157_Anaerolineales_55_23 (50%)	2	2169 bp	60.21	8.99	94.33
bjp_ig2599_scaffold_44175 Species: CG_Anaero_01 (50%)	2	1426 bp	60.31	9.05	57.22
bjp_ig2599_scaffold_52772 Species: CG_Anaero_01 (50%)	2	1239 bp	61.66	10.77	91.77
bjp_ig2599_scaffold_52774 Species: GWC2_Chloroflexi_49_37_curated (100%)	2	1239 bp	63.03	10.29	99.76
bjp_ig2599_scaffold_64593 Species: GWC2_Chloroflexi_49_37_curated (100%)	2	1055 bp	63.03	10.38	96.11
bjp_ig2599_scaffold_28526 Species: RBG_16_Chloroflexi_56_8_curated (50%)	2	1994 bp	62.64	12.34	96.59
bjp_ig2599_scaffold_24231 Species: RBG_16_Chloroflexi_51_16_curated (50%)	2	2262 bp	63.00	11.60	89.79
bjp_ig2599_scaffold_18193 Species: RBG_19FT_COMBO_Chloroflexi_55_16_curated (50%)	2	2851 bp	59.52	10.47	91.97
bjp_ig2599_scaffold_22170 Species: GWC2_Chloroflexi_49_37_curated (100%)	2	2428 bp	64.74	13.10	98.11
bjp_ig2599_scaffold_52017 Species: CSP1_4_Chloroflexi (50%)	2	1252 bp	62.78	8.39	97.52
bjp_ig2599_scaffold_36988 Species: BJP_IG2157_Anaerolineales_55_23 (50%)	2	1636 bp	61.06	10.36	100.12
bjp_ig2599_scaffold_30420 Species: CG_Anaero_03 (50%)	2	1901 bp	61.02	14.99	96.74
bjp_ig2599_scaffold_23471 Species: CG_Anaero_04 (50%)	2	2322 bp	60.98	9.24	97.16
bjp_ig2599_scaffold_34578 Species: Anaerolinea thermophila (50%)	2	1721 bp	59.62	11.85	63.80
bjp_ig2599_scaffold_42938 Species: BJP_IG2157_Anaerolineales_55_23 (50%)	2	2048 bp	63.72	13.62	98.44
bjp_ig2599_scaffold_64370 Species: RBG_16_Armatimonadetes_67_12_curated (50%)	2	1058 bp	64.08	15.60	88.75
bjp_ig2599_scaffold_34073 Species: GWC2_Chloroflexi_49_37_curated (50%)	2	1741 bp	61.29	9.82	95.46
bjp_ig2599_scaffold_25172 Species: CG_Anaero_01 (50%)	2	2200 bp	61.23	10.84	93.95
bjp_ig2599_scaffold_44491 Species: RBG_16_Chloroflexi_54_18_curated (50%)	2	1417 bp	60.83	9.84	91.25
bjp_ig2599_scaffold_38570 Species: CG_Anaero_04 (50%)	2	1586 bp	62.30	10.97	97.04
bjp_ig2599_scaffold_27663 Species: BJP_IG2158_Anaerolineales_38_74 (50%)	2	2042 bp	58.37	8.59	84.48
bjp_ig2599_scaffold_55565 Species: RBG_19FT_COMBO_Chloroflexi_49_13_curated (50%)	2	1191 bp	62.97	10.33	99.24
bjp_ig2599_scaffold_20065 Species: GWC2_Chloroflexi_49_37_curated (50%)	2	2629 bp	62.80	10.04	96.77
bjp_ig2599_scaffold_30990 Species: CG_Anaero_01 (50%)	2	1874 bp	62.81	12.97	99.73
bjp_ig2599_scaffold_34110 Species: GWC2_Chloroflexi_49_37_curated (100%)	2	1739 bp	61.64	9.49	100.06
bjp_ig2599_scaffold_34112 Species: CG_Anaero_01 (100%)	2	1739 bp	61.59	10.01	96.95
bjp_ig2599_scaffold_38334 Species: Roseiflexus castenholzii (50%)	2	1592 bp	61.75	9.70	93.28
bjp_ig2599_scaffold_13589 Species: GWC2_Chloroflexi_49_37_curated (50%)	2	3580 bp	58.10	9.80	96.96
bjp_ig2599_scaffold_28101 Species: RBG_19FT_COMBO_Chloroflexi_55_16_curated (50%)	2	2017 bp	63.16	11.60	86.27
bjp_ig2599_scaffold_39400 Species: CG_Anaero_01 (50%)	2	1560 bp	62.12	9.33	100.19
bjp_ig2599_scaffold_56894 Species: CG_Anaero_01 (100%)	2	1169 bp	62.96	9.88	97.78
bjp_ig2599_scaffold_48663 Species: marine sediment metagenome (50%)	2	1320 bp	59.47	12.05	100.68
bjp_ig2599_scaffold_11271 Species: RBG_16_Chloroflexi_51_16_curated (50%)	2	4117 bp	61.43	9.29	91.81
bjp_ig2599_scaffold_26319 Species: RBG_16_Chloroflexi_56_8_curated (50%)	2	2123 bp	61.52	10.60	84.79
bjp_ig2599_scaffold_40887 Species: uncultured Chloroflexi bacterium (50%)	2	1515 bp	59.87	9.31	76.63
bjp_ig2599_scaffold_31626 Species: Anaerolinea thermophila (50%)	2	1845 bp	61.41	11.06	78.37
bjp_ig2599_scaffold_29436 Species: CG_Anaero_01 (50%)	2	1948 bp	57.85	9.16	89.48
bjp_ig2599_scaffold_65391 Species: CG_Anaero_04 (50%)	2	1045 bp	63.83	11.91	98.76
bjp_ig2599_scaffold_34157 Species: CG_Anaero_01 (50%)	2	1737 bp	62.41	10.28	93.26
bjp_ig2599_scaffold_30784 Species: RBG_16_Chloroflexi_51_16_curated (50%)	2	1884 bp	61.25	9.63	99.84
bjp_ig2599_scaffold_48185 Species: CG_Anaero_03 (50%)	2	1331 bp	62.43	13.75	80.02
bjp_ig2599_scaffold_27980 Species: RBG_16_Chloroflexi_64_43_curated (50%)	2	2023 bp	59.32	8.60	99.06
bjp_ig2599_scaffold_18316 Species: RBG_16_Chloroflexi_64_43_curated (50%)	2	2833 bp	61.24	8.10	99.01
bjp_ig2599_scaffold_63124 Species: RBG_19FT_COMBO_Chloroflexi_55_16_curated (50%)	2	1780 bp	60.79	9.27	100.11
bjp_ig2599_scaffold_22811 Species: uncultured Chloroflexi bacterium (100%)	2	2375 bp	62.36	9.92	94.11
bjp_ig2599_scaffold_17600 Species: CG_Anaero_01 (100%)	2	2926 bp	59.67	12.05	89.10
bjp_ig2599_scaffold_28159 Species: Anaerolinea thermophila (50%)	2	2013 bp	62.79	10.80	94.78
bjp_ig2599_scaffold_58221 Species: CG_Anaero_01 (100%)	2	1147 bp	63.30	8.24	99.65

Displaying items 51-100 of 392 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (BJP_ig2599_Miz_0z1_300_2014_Chloroflexi_59_11) and add all its contigs / scaffolds to the organism you choose below

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Other organism

BJP_ig2599_Miz_0z1_300_2014_Chloroflexi_59_11

BJP_IG2599_Chloroflexi_59_11

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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