ggKbase | organisms

Consensus taxonomy: Chloroflexi → Bacteria

Metagenomic Context

Parent: BJP_IG2599_UNK

Properties

Avg. coverage: 10.95 Longest contig: 34.92 Kbp Bin length: 1.82 Mbp GC content: 59.36 %

Contigs count: 392 Features count: 2039 rRNAs count: 0 tRNAs count: 28

Genome completeness

partial RP 42 / 55 MC: 2 BSCG 40 / 51 ASCG 10 / 38 MC: 2

Displaying items 301-350 of 392 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
bjp_ig2599_scaffold_28101 Species: RBG_19FT_COMBO_Chloroflexi_55_16_curated (50%)	2	2017 bp	63.16	11.60	86.27
bjp_ig2599_scaffold_39400 Species: CG_Anaero_01 (50%)	2	1560 bp	62.12	9.33	100.19
bjp_ig2599_scaffold_56894 Species: CG_Anaero_01 (100%)	2	1169 bp	62.96	9.88	97.78
bjp_ig2599_scaffold_48663 Species: marine sediment metagenome (50%)	2	1320 bp	59.47	12.05	100.68
bjp_ig2599_scaffold_11271 Species: RBG_16_Chloroflexi_51_16_curated (50%)	2	4117 bp	61.43	9.29	91.81
bjp_ig2599_scaffold_26319 Species: RBG_16_Chloroflexi_56_8_curated (50%)	2	2123 bp	61.52	10.60	84.79
bjp_ig2599_scaffold_40887 Species: uncultured Chloroflexi bacterium (50%)	2	1515 bp	59.87	9.31	76.63
bjp_ig2599_scaffold_31626 Species: Anaerolinea thermophila (50%)	2	1845 bp	61.41	11.06	78.37
bjp_ig2599_scaffold_29436 Species: CG_Anaero_01 (50%)	2	1948 bp	57.85	9.16	89.48
bjp_ig2599_scaffold_65391 Species: CG_Anaero_04 (50%)	2	1045 bp	63.83	11.91	98.76
bjp_ig2599_scaffold_34157 Species: CG_Anaero_01 (50%)	2	1737 bp	62.41	10.28	93.26
bjp_ig2599_scaffold_30784 Species: RBG_16_Chloroflexi_51_16_curated (50%)	2	1884 bp	61.25	9.63	99.84
bjp_ig2599_scaffold_48185 Species: CG_Anaero_03 (50%)	2	1331 bp	62.43	13.75	80.02
bjp_ig2599_scaffold_27980 Species: RBG_16_Chloroflexi_64_43_curated (50%)	2	2023 bp	59.32	8.60	99.06
bjp_ig2599_scaffold_18316 Species: RBG_16_Chloroflexi_64_43_curated (50%)	2	2833 bp	61.24	8.10	99.01
bjp_ig2599_scaffold_63124 Species: RBG_19FT_COMBO_Chloroflexi_55_16_curated (50%)	2	1780 bp	60.79	9.27	100.11
bjp_ig2599_scaffold_22811 Species: uncultured Chloroflexi bacterium (100%)	2	2375 bp	62.36	9.92	94.11
bjp_ig2599_scaffold_17600 Species: CG_Anaero_01 (100%)	2	2926 bp	59.67	12.05	89.10
bjp_ig2599_scaffold_28159 Species: Anaerolinea thermophila (50%)	2	2013 bp	62.79	10.80	94.78
bjp_ig2599_scaffold_58221 Species: CG_Anaero_01 (100%)	2	1147 bp	63.30	8.24	99.65
bjp_ig2599_scaffold_14470 Species: GWC2_Chloroflexi_49_37_curated (100%)	2	3411 bp	59.22	12.05	81.79
bjp_ig2599_scaffold_110044 Species: CG_Anaero_01 (50%)	2	1346 bp	59.73	12.37	70.21
bjp_ig2599_scaffold_25546 Species: RBG_13_Chloroflexi_50_21_curated (50%)	2	2174 bp	63.06	9.31	93.01
bjp_ig2599_scaffold_62140 Species: GWC2_Chloroflexi_49_37_curated (100%)	2	1087 bp	62.37	10.63	100.18
bjp_ig2599_scaffold_46317 Species: RBG_19FT_COMBO_Chloroflexi_55_16_curated (50%)	2	1373 bp	62.27	10.82	100.29
bjp_ig2599_scaffold_46575 Species: CG_Anaero_01 (100%)	2	1367 bp	61.67	9.44	82.08
bjp_ig2599_scaffold_67868 Species: RBG_16_Chloroflexi_56_8_curated (50%)	2	1014 bp	64.20	10.21	97.34
bjp_ig2599_scaffold_53909 Species: Sphaerobacter thermophilus (100%)	2	1219 bp	66.04	10.34	99.18
bjp_ig2599_scaffold_27521 Species: CG_Anaero_01 (100%)	2	2050 bp	63.80	10.32	90.73
bjp_ig2599_scaffold_24930 Species: CG_Anaero_03 (50%)	2	2216 bp	59.93	9.95	84.61
bjp_ig2599_scaffold_25829 Species: CG_Anaero_01 (50%)	2	2154 bp	61.19	10.17	93.04
bjp_ig2599_scaffold_52458 Species: GWC2_Chloroflexi_49_37_curated (50%)	2	1244 bp	61.74	8.56	98.15
bjp_ig2599_scaffold_23135 Species: CG_Anaero_01 (50%)	2	2348 bp	62.10	12.07	84.71
bjp_ig2599_scaffold_42848 Species: Anaerolinea thermophila (50%)	2	1459 bp	59.63	10.38	89.24
bjp_ig2599_scaffold_47816 Species: BJP_IG2157_Anaerolineales_55_23 (50%)	2	1339 bp	60.87	7.62	94.32
bjp_ig2599_scaffold_51577 Species: RBG_16_Chloroflexi_57_11_curated (50%)	2	1262 bp	66.24	7.96	101.51
bjp_ig2599_scaffold_22623 Species: CG_Anaero_04 (50%)	2	2391 bp	62.78	8.91	96.49
bjp_ig2599_scaffold_35578 Species: RBG_16_Spirochaete_67_19_curated (50%)	2	1684 bp	59.80	9.17	94.06
bjp_ig2599_scaffold_24954 Species: Anaerolinea thermophila (50%)	2	2214 bp	60.34	11.11	98.92
bjp_ig2599_scaffold_35835 Species: RBG_13_Chloroflexi_50_21_curated (50%)	2	1675 bp	62.63	11.55	88.48
bjp_ig2599_scaffold_61561 Species: GWC2_Chloroflexi_49_37_curated (50%)	2	1096 bp	63.23	9.31	94.98
bjp_ig2599_scaffold_20468 Species: CG_Anaero_03 (50%)	2	2591 bp	62.45	10.94	90.20
bjp_ig2599_scaffold_62186 Species: RBG_19FT_COMBO_Chloroflexi_50_10_curated (50%)	2	1087 bp	60.53	8.69	100.18
bjp_ig2599_scaffold_46363 Species: RBG_16_Chloroflexi_51_16_curated (50%)	2	1372 bp	60.28	9.18	88.34
bjp_ig2599_scaffold_53691 Species: GWC2_Chloroflexi_49_37_curated (100%)	2	1223 bp	62.47	12.26	99.59
bjp_ig2599_scaffold_54320 Species: CG_Anaero_01 (100%)	1	1212 bp	59.24	10.77	88.86
bjp_ig2599_scaffold_36692 Species: BJP_IG2158_Anaerolineales_38_74 (100%)	1	1648 bp	64.14	13.29	99.94
bjp_ig2599_scaffold_57907 Species: CG_Arma_02 (100%)	1	1152 bp	63.98	8.72	100.00
bjp_ig2599_scaffold_38491 Species: BJP_IG2158_Anaerolineales_38_74 (100%)	1	1588 bp	61.52	10.77	81.05
bjp_ig2599_scaffold_38760 Species: RBG_19FT_COMBO_Chloroflexi_56_12_curated (100%)	1	1579 bp	63.14	10.73	90.82

Displaying items 301-350 of 392 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (BJP_ig2599_Miz_0z1_300_2014_Chloroflexi_59_11) and add all its contigs / scaffolds to the organism you choose below

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Other organism

BJP_ig2599_Miz_0z1_300_2014_Chloroflexi_59_11

BJP_IG2599_Chloroflexi_59_11

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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