ggKbase home page

scn_reactorb_scaffold_5220_7

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(7386..8321)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJP0_ACEWD similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 306.0
  • Bit_score: 344
  • Evalue 6.50e-92
xer; tyrosine recombinase Xer similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 306.0
  • Bit_score: 344
  • Evalue 1.80e-92
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 306.0
  • Bit_score: 344
  • Evalue 9.20e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acetobacterium woodii → Acetobacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 936
ATGTTTAATTTTCAAAACACAATATTGAAATATTTAGATTATTGTGATTATCAAAAAAATCTTAACAGCAAAACATTAAAGGCATATAGTATTGATTTGAAGCAATTTTCAGAATATATGTCTAAGGAAAATTTAGAGTTTAATAGAAATAATTTATCAAGCTTTATTACATTTCTTCATAAAAATTATAAGCCAAAAACTGTTAAACGAAAAGTAGCAAGTATCAAGGCGTTTTTTAAATTTTTAGAATATGAGGAAATTATTGATGCAAACCCATTCAACAAATTAGAGATAAAATACAAAGTTCCTGTTTTGCTTCCTAAAACAATATCAACACAAAGCTTAGAACTTCTATTTAAGTATGTGTATGATTCTTTAAATGCCAAATGTATTACAGAGTATAAAAGAAGAACGATTTTAAGAGATATTGCAGTATTAGAGCTTTTGTTTTCGTCTGGATTGCGTGTATCTGAATTATGTTGTTTAAATCTTCGTGATATTGATTTAAATCAAGGAGTGTTAAGAATCTATGGAAAGGGTGCAAAAGAAAGATTAATAGTAATAACAAATAAAAATGTTTTACAAGCACTTAAAAATTATATTGATGTATCTGGTATAAATACAGAATTATCAAATTTCCTTTTTACAAATCGTTTAGGAAATAGGTTATCAGAACAATCTGTTAGGTTTATGATATATAAGTATGTAAATATTCTGAATATACCTGAGAATATAACCCCTCATATGTTTAGACATACCTTTGCAACAATGTTGTTAGAAGAAGATGTTGACATAAGGTATATTCAACAAATCTTAGGTCATAGCTCTATACTAACAACACAAATATATACTCATGTTGCAGCAAAAAAGCAAAGGGATATTTTGACATTGAAGAATCCACGTAATAGGATAAATGTTGGGGTAAGTGTTAATTAG
PROTEIN sequence
Length: 312
MFNFQNTILKYLDYCDYQKNLNSKTLKAYSIDLKQFSEYMSKENLEFNRNNLSSFITFLHKNYKPKTVKRKVASIKAFFKFLEYEEIIDANPFNKLEIKYKVPVLLPKTISTQSLELLFKYVYDSLNAKCITEYKRRTILRDIAVLELLFSSGLRVSELCCLNLRDIDLNQGVLRIYGKGAKERLIVITNKNVLQALKNYIDVSGINTELSNFLFTNRLGNRLSEQSVRFMIYKYVNILNIPENITPHMFRHTFATMLLEEDVDIRYIQQILGHSSILTTQIYTHVAAKKQRDILTLKNPRNRINVGVSVN*