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scn_reactorb_scaffold_18137_2

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 1282..2064

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, FliA/WhiG family n=1 Tax=Clostridium sp. MSTE9 RepID=J0N6U6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 257.0
  • Bit_score: 236
  • Evalue 1.60e-59
RNA polymerase sigma factor, FliA/WhiG family {ECO:0000313|EMBL:EJF40182.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 257.0
  • Bit_score: 236
  • Evalue 2.20e-59
RNA polymerase sigma 28 subunit FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 244.0
  • Bit_score: 211
  • Evalue 2.70e-52

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Taxonomy

Clostridium sp. MSTE9 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 783
GTGCATGGGCATAGTTGTATGGAAATCATTAAGGATGATAAAATCACAACAGATGAAAATGAGCTATGGAAAAGATACTTTCAAAACAGAGATATAGCGGCTCGCAATAAATTAGTTGAAAAATACGCCTTTGTCGTCAAAGTGATTGCTATGAAGATTTGGGGTATGTATCACCAGTATGGCGATGTCGAAGATATTGTAAATGAAGGTATCATAGCCTTAATAGATGCTGTGGGAAGATTTGATGTATCAAAGGATATAAAATTTGAAACATTTGCTTCTATTAAGATAAGAGGAGCTATAATAGACTATGTCAGAAAACAAGCTTGGTCACCAAGACGTGTCAATAAAAATAGAAAGCTTGTAGAAAATGCTGATAAGGAATTGAAAATTAAGCTTGGCAGAACTCCTTCTGAACAAGAAATGGCAGATTATCTGAAAATTGATGTAACAGATTACAGCAAAATGATTTTAGAGACAAATAATTCTAATTTACTCTCATTTGAAGAGCTAATATCAGAGCTTTCTTATAAAAATTCTGCTACATCTGATGATTTAACCCCGGAAGATAATTATGCAAAGCAGGAGTTAAAAAGTGTGTTGGCTGATGCTATAAGCCAGCTAGAGGAAAAGGAAAAAATAGTTATATCCTTGTATTATAAGGAGGAGTTAAAGCTTAAAGAAATTGCAGATGTAATGGAAATAAGCAACTCAAGAGTTTCACAAATCCATTCACAGGCAATATCAAAATTAAGTAATTATTTGAAAAAATATATGAATTAA
PROTEIN sequence
Length: 261
VHGHSCMEIIKDDKITTDENELWKRYFQNRDIAARNKLVEKYAFVVKVIAMKIWGMYHQYGDVEDIVNEGIIALIDAVGRFDVSKDIKFETFASIKIRGAIIDYVRKQAWSPRRVNKNRKLVENADKELKIKLGRTPSEQEMADYLKIDVTDYSKMILETNNSNLLSFEELISELSYKNSATSDDLTPEDNYAKQELKSVLADAISQLEEKEKIVISLYYKEELKLKEIADVMEISNSRVSQIHSQAISKLSNYLKKYMN*