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scn_reactorb_scaffold_15416_1

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2..889)

Top 3 Functional Annotations

Value Algorithm Source
Putative dockerin type I repeat-containing domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K1S9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 28.9
  • Coverage: 194.0
  • Bit_score: 68
  • Evalue 1.10e-08
Putative dockerin type I repeat-containing domain protein {ECO:0000313|EMBL:ERJ92481.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.9
  • Coverage: 194.0
  • Bit_score: 68
  • Evalue 1.60e-08
Ig domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 26.7
  • Coverage: 236.0
  • Bit_score: 63
  • Evalue 6.00e-08

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Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 888
ATGGTTTTTTTTTGTTTTAGGCTTAGTATGCAATTATCAAAAGATAGAAGTCAAATTATATCCGTCAGCAACGATGATATCAAAGAGGGTTACTTTATAATTCCAGATACCGTAACTTATATTCAATATGAGGCATTTCGAGGGTGTACAGAACTTAGAACGTTATGTTTACCTCGTAAGGATATAACTATAAGTTGTCATGCATTTATAGGGTGCACCAATCTCACTACAATACAACTTCCTGAAGGTGCGACGATTGGGCAAGATAAATTTACAGATTGCACTGAACTTAAGTATATTGTGGTGGATACGAATCAGGATGATGAACTGTCTAGAATAAATGGTTTATTCAAAAGCGTTCTATTTAAAGTTTTAAAAAAATCAACATATAGCCAAATACTTCATTTACAAAACATGGCTTATCAAAAGATTATCCAAGACCCTCAGGCCAATAGCTTATTTCCAAATCAGGATTCTCTTGGGTTGGTTGTTGATATTTTACCCCTTATCTCTGCCTATGAGGGCAAAGAGCACTTAGCTTCTCAGTTGTTAAGAAGTGAACTCGCTAAAGCGAGTTTTATGGAAATTGAAGGTCAATTAGATAAGTATAAAGAGTATTTAGATTCAATTGTGCAATACGTTAAATTAAATAATCTCATTATCGCAGACCAAAGAAGTCAATGTGCGATAAAGCTCGAGGGTTACGTAAACACCATTGAGAGCCTAATTGAGTACAAGGGTAAGCAGCATCCTGGATTTTTTGCATGCAAGCCAGAACTAGATGCCCAACTGTGTGAGCAACTGATGGCAGTGAAGCAACTCATTCAATATTTACGCGAAAAAGTAAGTTGTACGCTATCCTCAAAGGCAATAGACTATCTAAGCCAG
PROTEIN sequence
Length: 296
MVFFCFRLSMQLSKDRSQIISVSNDDIKEGYFIIPDTVTYIQYEAFRGCTELRTLCLPRKDITISCHAFIGCTNLTTIQLPEGATIGQDKFTDCTELKYIVVDTNQDDELSRINGLFKSVLFKVLKKSTYSQILHLQNMAYQKIIQDPQANSLFPNQDSLGLVVDILPLISAYEGKEHLASQLLRSELAKASFMEIEGQLDKYKEYLDSIVQYVKLNNLIIADQRSQCAIKLEGYVNTIESLIEYKGKQHPGFFACKPELDAQLCEQLMAVKQLIQYLREKVSCTLSSKAIDYLSQ