ggKbase home page

scn_reactorb_scaffold_42219_8

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(5106..5978)

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide transport system permease protein OppC n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CDQ3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 288.0
  • Bit_score: 334
  • Evalue 6.30e-89
Oligopeptide transport system permease protein OppC {ECO:0000313|EMBL:EOD00415.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 288.0
  • Bit_score: 334
  • Evalue 8.80e-89
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 278.0
  • Bit_score: 318
  • Evalue 1.70e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 873
ATGAAAAAAGATAGATCTCAAACATTTTGGGGAAATGTATTGCAAAGATTTAGGAAGGATAAAAAGGCTCTGATAAGCTTTTATATACTTTTAGCTATTGTTTTAGCTTGTGTATTTGTTCCTGTATTTTCTCCATATGCTATGGAAAAAACTGAAACCTCTAATGAGGCGATTAGAGATAGAGCCCCTAGCGCTGCTCATATCTTAGGTACAGATGACTTAGGAAGGGATATATTCACAAGACTGTTTTATGCAGGTAGAATTTCCTTGGGACTTGCCCTTGTCGTAGTCTTTATAGAATGTGTAATAGGCATAATACTCGGATCAATTGCGGGATTTTATGGTGGTATTGCAGATACTATAATAATGCGTTTATCAGAAATATTTATGTCATTTCCGTTCATGATATTTGCTATAACAGCCACTGCAATATTAGGAACAGGTGTTAAAACTTTAATCATAGTTTTATCTATCCTTAGCTGGCCAAGTATAGCAAGAATAGTAAGAGGACAAATTCTTACTCTTCGTGAAATGGAATATATGGAGGCTTGTGAAGCTCTCGGCATAAGTGATTTTAAGAGAATATTCAAGCATTTGCTGCCAAATGTTTTGGCATATATCATAGTTTATGCAACTCTTGGTATGGCAGGTGTTATATTAACAGAAACCTCTCTTAGCTTTTTAGGACTTGGGGTATCTCCTCCTACTCCTACATGGGGCAATATGATGCAAGAGGCTCGTAATGTGCGTGTAATGCAGCTTAAATGGTGGTATTGGATTCCACCTGGAATCAGCATATTTATTTCAGTTATGTGCTTTAATTTGCTCGGTGACGGACTTAGAGATGCTATTGATCCTAAATTGAAAAGGTAG
PROTEIN sequence
Length: 291
MKKDRSQTFWGNVLQRFRKDKKALISFYILLAIVLACVFVPVFSPYAMEKTETSNEAIRDRAPSAAHILGTDDLGRDIFTRLFYAGRISLGLALVVVFIECVIGIILGSIAGFYGGIADTIIMRLSEIFMSFPFMIFAITATAILGTGVKTLIIVLSILSWPSIARIVRGQILTLREMEYMEACEALGISDFKRIFKHLLPNVLAYIIVYATLGMAGVILTETSLSFLGLGVSPPTPTWGNMMQEARNVRVMQLKWWYWIPPGISIFISVMCFNLLGDGLRDAIDPKLKR*