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scn_reactorb_scaffold_46168_3

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 1196..2188

Top 3 Functional Annotations

Value Algorithm Source
rluC1; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.24) similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 325.0
  • Bit_score: 292
  • Evalue 1.20e-76
Pseudouridine synthase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EHW3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 326.0
  • Bit_score: 393
  • Evalue 1.30e-106
Pseudouridine synthase {ECO:0000313|EMBL:CDA89607.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 326.0
  • Bit_score: 393
  • Evalue 1.80e-106

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Taxonomy

Firmicutes bacterium CAG:238 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 993
ATGAAGACAGGTGTTATTATGATTAAACTAACTATTAGCGGAAATGAAAAAGAACAAAGACTCGACAGATTTTTAAAAAAATATTTGAAAAATGCATCGCTTGGATATATTTATAAGCTAATTCGCAAGGATGTAAAAATCAATGGAAAAAGAGGAAGCATTGAAACCATGCTATCTGAGGGAGATGAAATTAGCTTATATATTAACGATGAGGAGTTGGATAGCTTAACAAAAAGTAAAAAGCACATAAAGTCAAAAAAACAATTTAATATCGCATATGAGGATGAAAATATTTTGATTGCTGAAAAACCTTTTGGTCTTTTAACTCATGGAGATTTTGAAGAAAAGAAAAACCACCTTGCAAATCAAGTAATTTCATATCTTATAGAAAAGGGAGATTATGTGCCGAGAGTGGAGCGTACCTTTGTCCCGTCTCCAGTGAACAGACTGGATAGAAATACTACAGGTCTTGTTTTGTTTGGGAAAAACAATAAATCTTTACAAATATTAAACAAGATGATAAGGGAAAGGGACTATATCAACAAGTATTATTTGACAATAGTTTCAGGAAATTTAAAAAAGGATTTGATTCTTAGAGACAAAATGGAAAAGGACGAAAGAAAAAATATGATTAAGGTCTTGCCAGAAGATTATGAAGATGGTAAAATAATGGAAACAATAGCAAGACCTATTAAATATAATAATGGCTTTACCTTAGTTGAGGTTGAGCTTGTGACAGGAAGAACTCATCAAATCAGAGCCCATTTGGCAAGAGCAGGGTATCCGATTATAGGTGATTCTAAATACGGTCATACAGCAGTGAACAGAAAAATAGAAGAGGACTTTGGACTCAGCACACAGTTTTTGCACGCTTATAGACTGTTCTTCATAGGCGCAGAGGAGCCTCTGGAGTATTTGGTAGGAAAAAATATTATAGCAGAGCTTCCAAAAAATTTAGAAGCGATTAAAAATTCTATTTTTGGGTATGAATAA
PROTEIN sequence
Length: 331
MKTGVIMIKLTISGNEKEQRLDRFLKKYLKNASLGYIYKLIRKDVKINGKRGSIETMLSEGDEISLYINDEELDSLTKSKKHIKSKKQFNIAYEDENILIAEKPFGLLTHGDFEEKKNHLANQVISYLIEKGDYVPRVERTFVPSPVNRLDRNTTGLVLFGKNNKSLQILNKMIRERDYINKYYLTIVSGNLKKDLILRDKMEKDERKNMIKVLPEDYEDGKIMETIARPIKYNNGFTLVEVELVTGRTHQIRAHLARAGYPIIGDSKYGHTAVNRKIEEDFGLSTQFLHAYRLFFIGAEEPLEYLVGKNIIAELPKNLEAIKNSIFGYE*