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scn_reactorb_scaffold_40211_4

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 3323..4756

Top 3 Functional Annotations

Value Algorithm Source
Arginine / Lysine / Ornithine decarboxylase {ECO:0000313|EMBL:EOD01056.1}; EC=4.1.1.17 {ECO:0000313|EMBL:EOD01056.1};; EC=4.1.1.18 {ECO:0000313|EMBL:EOD01056.1};; EC=4.1.1.19 {ECO:0000313|EMBL:EOD01056.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 477.0
  • Bit_score: 418
  • Evalue 7.70e-114
Arginine / Lysine / Ornithine decarboxylase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CQW9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 477.0
  • Bit_score: 418
  • Evalue 5.50e-114
Orn/Lys/Arg decarboxylase major subunit similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 474.0
  • Bit_score: 389
  • Evalue 7.70e-106

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Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1434
ATGAGCATTGAAAAAATTGAATTGATTGATGGAATCAAAAAGTTTAGACAAGAGGTACAAGTTAGCTTTCATATGCCTGGTCATAAGAACAAACCAAGTATTTTAAAAGAAATAGGTGAGAATTTACACGATTATGATATCACCGAAACAATTGGAACAGACAATTTACATTTTCCCACAGGAATGATTAAAAACACTTTAGAGAGTATTGGCAAATCGTATGGTGCAAAAAAGTCTTATATTGTTGTAAATGGCACTTCTTGCGGAGTTATTTCATCAATTATGGCGTGTACAAATCCCGGAGATTTTATATTAGTTCAAAGGGACTGCCATAAATCAGTATATAACGCAGTTATATTGGGCGGCTTAAAAGTTGAATATCTATATCCTGAGTTCAACAGAGAGCATGGTCTGAATTTCAGCGTTAGCTTGGAAAAATTAGAGCAAATGCTTATTGATTATCCAAAAATAAAATTAGTTGTTTTGACATATCCTACATTTTATGGTGTATGTTTTGATATTAAAAAAGCAGCTGAAATAGTTCATAAATATGGGAAAATTCTCATGATAGATGAAGCACACGGAAGTCACTTGAATTTCTGCAGCAAGCTCCCGCCGGCAGCAGAGAAATCAGGTGCTGATATAGTAGCTCAAAGTACTCATAAGACTTTGCCTGCTATGACACAAAGTTCAGTATTGCACGTTTGCAGTGACAGAGTGGATACAGAGAAGGTAAGCAGAATGCTGAGAATGCTTCAAACCACGAGTCCTTCATATGTATTGATGGCATCCGTACAAAGAGCTGTCGAATATATGGACAAATACGGCGAGGAAAGATTATGTAAAAACATTGAAATGTTTAGAGCTAAGACAAAGGAATTAAGAGATTTAGGAGTAAATGTCTTAACCGATGATTTCTTAAAGGAAAATGGAAGCCATGCTTTTGACGAGACGAGAGCCGTTATAAGCTTAAATGACGTTGGAATAAATGGAAAAGAGTTAGAAATCATATTGAGAGAAAAATACAAAATTCAAATGGAAATGTCTGATTTGATGTATGTGGTTGGATATATAACAGCCGCTGATGATCCTGAAGACATAGCAAGACTATTTGACAGCGTAAAGGAAATATACCTGGATGCTAAAAATTCAAATAAGGAAAGCAGCAGAGTTTTCATAGAAGAATTCCCACGTTTAACACAGGAAATTTCCATGAAGAACGCTTTCTATTCTGAAAGTGAGCTTGTTACTACCGAGGACTCGGTAGGAAGAATATCAGCTGACTTTATAATTCCATATCCTCCCGGAATTCCGCTTATCTGTCCAGGGGAAATTATTAAGGAAGAGACCATAGAGTACGCAAAATCTATATTAGCAAACAAAATTAATGTTAATGGAATTGATGATAAGAATATGCTAAGAGTTGTGAAATAA
PROTEIN sequence
Length: 478
MSIEKIELIDGIKKFRQEVQVSFHMPGHKNKPSILKEIGENLHDYDITETIGTDNLHFPTGMIKNTLESIGKSYGAKKSYIVVNGTSCGVISSIMACTNPGDFILVQRDCHKSVYNAVILGGLKVEYLYPEFNREHGLNFSVSLEKLEQMLIDYPKIKLVVLTYPTFYGVCFDIKKAAEIVHKYGKILMIDEAHGSHLNFCSKLPPAAEKSGADIVAQSTHKTLPAMTQSSVLHVCSDRVDTEKVSRMLRMLQTTSPSYVLMASVQRAVEYMDKYGEERLCKNIEMFRAKTKELRDLGVNVLTDDFLKENGSHAFDETRAVISLNDVGINGKELEIILREKYKIQMEMSDLMYVVGYITAADDPEDIARLFDSVKEIYLDAKNSNKESSRVFIEEFPRLTQEISMKNAFYSESELVTTEDSVGRISADFIIPYPPGIPLICPGEIIKEETIEYAKSILANKINVNGIDDKNMLRVVK*