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scn_reactorb_scaffold_119033_4

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2776..3234)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheW n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E301A9 similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 153.0
  • Bit_score: 148
  • Evalue 3.40e-33
Chemotaxis signal transduction protein {ECO:0000313|EMBL:EMS70044.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 144.0
  • Bit_score: 145
  • Evalue 5.20e-32
CheW protein similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 144.0
  • Bit_score: 139
  • Evalue 4.40e-31

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Taxonomy

[Clostridium] termitidis → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 459
ATGAGTGAGAATAATGTAATAATTAAAAAAGACGCAGAAACAGAAAAATACTTATCCTTTTATTCAGCAGATGTTGAGTACGGAGTAAATATCAAATATGTTACAGATATTATAAATCTATTACCAATAACATTTCTGCCAAAGATACCAAAATACATTAAAGGAATAGTAAACCTAAGAGGTAAAATAGTTCCTGTAATTGACATAAGAATGAGATTTGGCAAGGAAAGTATAGACTACACAGAAACAGCTTGCATCATCGTTATGGAATATTCAGACATCACAGTTGGTATATTAGTTGATGCTGTGGCAGAGGTATCTGATAAAGAAACAGCAAGCATTATGACACCACCAAAAAGCACTTCTGCTGAAATAAATAAATCTGTAAACGGAATTTCTAAGAAGAATAACAAGGTAAAATTATTAATTAACAGCATGAGTTTGTTTGAGGTCGAATAA
PROTEIN sequence
Length: 153
MSENNVIIKKDAETEKYLSFYSADVEYGVNIKYVTDIINLLPITFLPKIPKYIKGIVNLRGKIVPVIDIRMRFGKESIDYTETACIIVMEYSDITVGILVDAVAEVSDKETASIMTPPKSTSAEINKSVNGISKKNNKVKLLINSMSLFEVE*