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scn_reactorb_scaffold_119735_1

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(36..851)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, effector binding domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2ARM5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 269.0
  • Bit_score: 404
  • Evalue 4.60e-110
Bacterial transcription activator, effector binding {ECO:0000313|EMBL:CFY10982.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 271.0
  • Bit_score: 481
  • Evalue 7.10e-133
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 271.0
  • Bit_score: 434
  • Evalue 2.00e-119

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Taxonomy

Syntrophomonas zehnderi → Syntrophomonas → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 816
ATGTTTAAAATAGGAGAATTTTCAAAACTGACACAAGTAACAATACGAATGCTTCGATACTATGACGAGGTAGGACTTTTGAAGCCGGCAAATATTGATAAGTGGACAGGGTATCGTATGTATTCAGTCGAGCAAATACCTGTTCTAAACAAAATAATTTATCTTCGTGATAGTGGATTTAATGTTTCAGAAATTGCTGCAGCTCTTAATCTAACAGATGATAACTCTCTTGTGAAACAGCTTGATATGAAGTATCTAGAAGTAGAGAAAGCAATTCAAGCTGAACAGGAAAAATTGAAGAAAATAGAGTTTGCTAAAAATGAAATCTTAAACAAAAAAAGTGAAATGCACTACAATATTACAATTAAATCTATTCCGGGCTGTCAAGTTCTTTCCTTGCGTAGAACAATACCAAGCTACTATGCAGAAGGTGAGTTATGGCAAGAGCTATCTGATTTTGCCATGGAACAGCAAATACAAATATCGAGCAGCACATTTTCATTATACCATGATATCGAATATAAGGAAGCTGATGTTGATGTAGAGTTGTGTGCTCCTGTAAAAAAACAAGGAAAGAGTATAGGTGATTTTGTATTCCGCAATATTGAGCCAATACCAGCTATGGCTTGCACAATGGTATATGGAGCTTTTTCAAATATAGCTGGAGCATATATAGCCTTTGCAGAATGGCTGCAAAAGAATAGTCAATATAAAATGTACGGACCAAATCGGCAAATCGTACACTGCGGACCGTGGAACGAAAGTAACCCTGAAAAATATCTAACAGAGCTTCAAATACCATTAGAAATCATATAG
PROTEIN sequence
Length: 272
MFKIGEFSKLTQVTIRMLRYYDEVGLLKPANIDKWTGYRMYSVEQIPVLNKIIYLRDSGFNVSEIAAALNLTDDNSLVKQLDMKYLEVEKAIQAEQEKLKKIEFAKNEILNKKSEMHYNITIKSIPGCQVLSLRRTIPSYYAEGELWQELSDFAMEQQIQISSSTFSLYHDIEYKEADVDVELCAPVKKQGKSIGDFVFRNIEPIPAMACTMVYGAFSNIAGAYIAFAEWLQKNSQYKMYGPNRQIVHCGPWNESNPEKYLTELQIPLEII*