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scn_reactorb_scaffold_124268_8

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 2609..3163

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTU9_CLOSD similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 184.0
  • Bit_score: 258
  • Evalue 4.80e-66
rplF; 50S ribosomal subunit protein L6 similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 184.0
  • Bit_score: 258
  • Evalue 1.30e-66
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 184.0
  • Bit_score: 258
  • Evalue 6.70e-66

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Taxonomy

[Clostridium] sticklandii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 555
ATGTCAAGAATAGGATTAAAGCCTATAAATCTGCCTAGCAATGTTGAGCTTAAGATTAACGACAGTAATTTTGTAACAGTTAAAGGACCAAAAGGAACTTTAGAGCAACAGCTTTCTAAGTTAATGAAAATAGAAGTTTCTGAGGGACATATAAATGTTGTTAGACCAAATGACGAAAAGCAAAGCAGATCATTACATGGCTTAACAAGAACTTTATTAAACAATATGATTGTAGGCGTAACAGACGGATACGAAAAAGTTCTTGAAATTGTTGGTGTTGGATATAGAGCACAAAAACAAGGAAAGAAGCTTGTACTAAGCTTAGGATATTCCCATCCCGTTGAAATGGAAGATCCAAGCGGAATAGAAACAGTAGTTGAGCCAGGTGGAGGAAACATCCAAGGTAAGATTATAATAAAAGGTATAGATAAACAACAAGTTGGAAACTATGCTGCGGTAATTAGAGATTGGAGAAGACCAGAGCCATATAAAGGTAAAGGTATTAAGTACTCTAACGAAGTAATTAGACGTAAAGCTGGTAAGACTGGTAAATAA
PROTEIN sequence
Length: 185
MSRIGLKPINLPSNVELKINDSNFVTVKGPKGTLEQQLSKLMKIEVSEGHINVVRPNDEKQSRSLHGLTRTLLNNMIVGVTDGYEKVLEIVGVGYRAQKQGKKLVLSLGYSHPVEMEDPSGIETVVEPGGGNIQGKIIIKGIDKQQVGNYAAVIRDWRRPEPYKGKGIKYSNEVIRRKAGKTGK*