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FFSP_09242018_shore_0_2um_scaffold_1430_1

Organism: FFSP_09242018_shore_0_2um_Hydrogenophilales_62_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 8 ASCG 14 / 38 MC: 3
Location: 3..347

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase, sigma-24 subunit n=1 Tax=Ralstonia sp. PBA RepID=I9KXD1_9RALS similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 103.0
  • Bit_score: 100
  • Evalue 1.00e-18
ECF subfamily RNA polymerase, sigma-24 subunit {ECO:0000313|EMBL:EIZ04990.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 103.0
  • Bit_score: 100
  • Evalue 1.40e-18
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 117.0
  • Bit_score: 91
  • Evalue 1.00e-16

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Taxonomy

Ralstonia sp. PBA → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
TCCATCATGCACAATGTCTTTGTCAACGATGTGCGGCGCATGAGCAACCGGGTGGCCACAGACCCGATCGAGGAAGCCGTCGCGATGGGCATACCCGCGCCCCAGGAAAACCAGGTGCAGATGCGCGAGGTGCTGGCTGCGGTGGGCCGATTGGCGCCGGAGTTTCGTGAAGTGTTGGTGCTGGTGTCGGTTGAAGCGTTCAGTTACGCAGAAACAGCCAGGATTCTGGGCATACCCACGGGGACGGTGATGTCGCGCTTGTCCCGCGCACGCAACCAGCTGCGGGTGCTGACGGGAGAGCCTTCCCTGTCTGAAGCCCGTCCAGGGCTGCGGCTGGTGCGGTAA
PROTEIN sequence
Length: 115
SIMHNVFVNDVRRMSNRVATDPIEEAVAMGIPAPQENQVQMREVLAAVGRLAPEFREVLVLVSVEAFSYAETARILGIPTGTVMSRLSRARNQLRVLTGEPSLSEARPGLRLVR*