ggKbase home page

FFSP_09242018_shore_0_2um_scaffold_2327_3

Organism: FFSP_09242018_shore_0_2um_Hydrogenophilales_62_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 8 ASCG 14 / 38 MC: 3
Location: comp(1812..2453)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase A (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 210.0
  • Bit_score: 317
  • Evalue 1.70e-84
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003805446 similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 210.0
  • Bit_score: 337
  • Evalue 9.30e-90
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 222.0
  • Bit_score: 325
  • Evalue 3.90e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
GTGCCACCCATCGAGCCGCTATACGCCGACGCCAGTCTGCTGGTTTTCGACAAGCCCAGCGGCCTGCTGGCGGTGCCCGGGCGCGGTGCCGACAAGCAGGATTGCCTGAGCGCGCGGGCGCAGACTGCTTACCCCGATGCGCTGATCGTGCATCGTCTCGACATGGCTACTTCCGGGCTGATGCTGATGGCGCGTGACGCGGCCACCCAGCGTGCGTTGAGCCAGGCCTTCGCCGCGCGTGAGGTGACCAAGCGCTACCTCGCCGTGGTGGCGGGTCGCCTCGATGCCCCGCCCGGTGACTGGGGCATGATCGATTTGCCCATCATCGTCGACTGGCCCAACCGCCCGCTGCGCATCATCGATCATCAACTGGGCAAACCGAGCCAGACCCGCTGGCGCGTGCTGGGCTGCGACGCGAGCGGTGCGACCACCCGCATCGAACTTGAACCCGTTACGGGCCGCTCGCATCAGCTGCGCGTTCATCTGCGCGCGCTGGGCTATCCGATTGTGGGCGATGCCCTGTACGCGCCGCCGGCGGTGCAGGCGCAGTCGAATCGTTTGTTGTTGCATGCGGTTTCGCTGCGCTTCGCGCATCCGCTGACGGGGGCATTGATGACGTTCGAGTCGCCGCCGCCGTTCTGA
PROTEIN sequence
Length: 214
VPPIEPLYADASLLVFDKPSGLLAVPGRGADKQDCLSARAQTAYPDALIVHRLDMATSGLMLMARDAATQRALSQAFAAREVTKRYLAVVAGRLDAPPGDWGMIDLPIIVDWPNRPLRIIDHQLGKPSQTRWRVLGCDASGATTRIELEPVTGRSHQLRVHLRALGYPIVGDALYAPPAVQAQSNRLLLHAVSLRFAHPLTGALMTFESPPPF*