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OR_08142018_10m_0_1um_scaffold_1336_14

Organism: OR_08142018_10m_0_1um_Thiotrichales_46_111

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(10450..11190)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HN0_THICR similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 244.0
  • Bit_score: 321
  • Evalue 6.10e-85
sigma 28 (flagella/sporulation) similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 244.0
  • Bit_score: 321
  • Evalue 1.70e-85
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 244.0
  • Bit_score: 321
  • Evalue 8.60e-85

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Taxonomy

Thiomicrospira crunogena → Thiomicrospira → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGACGCCCGTTAAAGCCTATGCTCAAATGCAAAAGCAGCAAACTTCTCTGAGTGAGCAAATCGAGGCACACACTGATTTGGTGAAGCGTATTGCTTATCACTTAAAGGGGCGTTTGCCTTCCAGTGTGCAGGTTGATGATTTGGTGCAGTCGGGCATGATTGGGCTGATTGAGGCAGTGCAAAAGTACGATGCCAGTCAGGGTGCGAGTTTTGAAACCTATGCCGGTATCCGTATTCGCGGTGCGATGTTGGATGAAATTCGTAAAGGGGATTGGACACCGCGCTCTGTACATCGTAAGTCGCGCGAGGTGTCTGAGGCCATTCGGTCGATTGGGGCAACAACAGGGCGAGAAGCCAAAGACGAAGAAGTTGCAAAACTTTTGGGTATGTCCATGTCGGAATATCATCAAGTGTTGCAAGATTCGGTGACGACACAGGTGTTATCAATCGATATGCCTGATCATGACGAGTTATCTGAGGATCAACTAACGCTGAATCATGCTTCAGATATGGCTGAACCCATGCAAGACCTGATGCAGTCTCAGTTTCAGGGGCAGCTAGCGGAGGCGATTGCCAGTTTGCCAGAGCGAGAGCAGTTGGTCATGTCTTTATATTATGATGAAGAATTGAATTTGAAAGAAATTGGGGAAGTGCTTAATGTCAGTGAGTCGCGTGTGTGTCAGATTCACGGTCAAGCATTGTTGCGCATCCGTTCGCGTTTAAAAGAATGGGCTGAATAG
PROTEIN sequence
Length: 247
MTPVKAYAQMQKQQTSLSEQIEAHTDLVKRIAYHLKGRLPSSVQVDDLVQSGMIGLIEAVQKYDASQGASFETYAGIRIRGAMLDEIRKGDWTPRSVHRKSREVSEAIRSIGATTGREAKDEEVAKLLGMSMSEYHQVLQDSVTTQVLSIDMPDHDELSEDQLTLNHASDMAEPMQDLMQSQFQGQLAEAIASLPEREQLVMSLYYDEELNLKEIGEVLNVSESRVCQIHGQALLRIRSRLKEWAE*