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RTP_02272018_0_2um_scaffold_180

Search features with annotation key words

Displaying items 31-60 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_180_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24610..25446)
DNA (837bp) protein (279aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C2573
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_180_31
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25453..26112)
DNA (660bp) protein (220aa)
LemA family protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F2857
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_180_32
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26151..27203)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003769A50
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_180_33
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27222..27887)
DNA (666bp) protein (222aa)
DNA polymerase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B35B3
phage DNA polymerase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_180_34
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27881..28363)
DNA (483bp) protein (161aa)
30S ribosomal protein S18 (EC:2.3.1.-)
alanine acetyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000378B1CD
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_180_35
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28360..29049)
DNA (690bp) protein (230aa)
glycoprotease n=1 Tax=Thiobacillus thioparus RepID=UPI00037E5700
glycoprotease
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_180_36
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29137..29547)
DNA (411bp) protein (137aa)
Putative uncharacterized protein id=1348664 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_180_37
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29722..31158
DNA (1437bp) protein (479aa)
Nucleotide binding protein id=1348665 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
nucleotide binding protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_180_38
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31179..32045
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037FD12A
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_180_39
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32112..32609
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036DBC10
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_180_40
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32837..32998)
DNA (162bp) protein (54aa)
id=4961698 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RTP_02272018_0_2um_scaffold_180_41
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33011..33244)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F33E8
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
RTP_02272018_0_2um_scaffold_180_42
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33325..33975)
DNA (651bp) protein (217aa)
isoprenylcysteine carboxyl methyltransferase n=1 Tax=Azoarcus toluclasticus RepID=UPI00036D4EC2
isoprenylcysteine carboxyl methyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
RTP_02272018_0_2um_scaffold_180_43
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(33972..34160)
DNA (189bp) protein (63aa)
hypothetical protein id=14429972 bin=bin3_NC10 species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
RTP_02272018_0_2um_scaffold_180_44
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34173..34655)
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ91_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97276.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_180_45
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34652..35470)
DNA (819bp) protein (273aa)
UbiE/COQ5 methyltransferase (EC:2.1.1.103); K05929 phosphoethanolamine N-methyltransferase [EC:2.1.1.103] id=15193195 bin=GWC2_NOV_55_46 species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
UbiE/COQ5 methyltransferase (EC:2.1.1.103)
Tax=RBG_16_Gamma2_65_34_curated
RTP_02272018_0_2um_scaffold_180_46
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35467..36087)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000368F466
hypothetical protein
Tax=RBG_16_Gamma2_65_34_curated
RTP_02272018_0_2um_scaffold_180_47
GWA1_OD1_Wolfebacteria_42_9_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(36084..36770)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000375F917
protein-disulfide isomerase
Tax=GWA1_OD1_Wolfebacteria_42_9_curated
RTP_02272018_0_2um_scaffold_180_48
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36773..39118)
DNA (2346bp) protein (782aa)
cation-transporting ATPase transmembrane protein n=1 Tax=Methylotenera mobilis RepID=UPI000380151C
ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RTP_02272018_0_2um_scaffold_180_49
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39164..39448)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Methylotenera mobilis RepID=UPI0003802FD3
Tax=GWA2_Gallionellales_59_43_curated
RTP_02272018_0_2um_scaffold_180_50
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39436..40263)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036CBF2C
response regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
RTP_02272018_0_2um_scaffold_180_51
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40330..40638)
DNA (309bp) protein (103aa)
hypothetical protein id=12498622 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RTP_02272018_0_2um_scaffold_180_52
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40924..41151)
DNA (228bp) protein (76aa)
Uncharacterized protein id=1351596 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rhodanese-like protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_180_53
unknown

Not on your lists

comp(41207..41347)
DNA (141bp) protein (47aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_180_54
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41347..41478)
DNA (132bp) protein (44aa)
Tax=RBG_16_Gammaproteobacteria_62_13__curated
RTP_02272018_0_2um_scaffold_180_55
unknown

Not on your lists

comp(41468..41575)
DNA (108bp) protein (36aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_180_56
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41585..41839)
DNA (255bp) protein (85aa)
id=4961696 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
RTP_02272018_0_2um_scaffold_180_57
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42184..42657)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003725B88
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_180_58
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42689..43024)
DNA (336bp) protein (112aa)
Conserved hypothetical secreted protein id=1351592 bin=GWE1_T_denit_62_9 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_180_59
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43036..43476)
DNA (441bp) protein (147aa)
Uncharacterized protein id=1362320 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 31-60 of 89 in total

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