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RTP_02272018_0_2um_scaffold_410_32

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(27568..28242)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal small subunit pseudouridine synthase A (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 223.0
  • Bit_score: 343
  • Evalue 3.00e-92
Pseudouridine synthase id=1362740 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 221.0
  • Bit_score: 399
  • Evalue 1.60e-108
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 221.0
  • Bit_score: 399
  • Evalue 2.30e-108

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGTGCGAGGCGCGCGTGCGGGCAGGCGCGGTCGAGGTCAACGGCGCGGTTTGCGACGACCCCGAGCTCGAAGTGGACCCGGCCGGACTCGAACTCACGGTCGATGGCGTCACCTGGGCCTACCGTGAAAAGGCCTATGTGCTGGTGCACAAGCCGGCCGGATACGAGTGCTCGCACCATCCCAGCCATCACCGCAGCGTGTTTTCCCTGCTGCCGCCGCCGCTGCTGCAACGCGGGGTGCAATGCGTCGGGCGGCTCGACCAGGACACCACGGGACTGCTGCTGTTTTCCGACGATGGCCAGTTCATTCACCGCATGATTTCGCCCAAAAAAGGCGTGCCCAAGGTGTACCGAGCCATCTGTGCCGATCCGCTCTCCGACGCCATGCTGGACGCCTTGCGCAGCGGCGTGCAACTCAACGACGAGCCGGCGCCGATAGCCGCGCTGGCGTGCGAAGCGATCGATACTTACACGCTGCGCCTATCCCTCGCCGAGGGCAAATACCATCAGGTCAAGCGCATGATCGCGGCAACCGGCAACCGGGTCGAAGCGCTGCATCGCGAGGCCATCGGCCACTACGCATTGCCCGCGACGTTGGCACCCGGTGAATGGCGCTGGCTGGACGACGACGACCTGAAGCAACTGGAGCAGCCATGGCAATCCGCGATGTCCTGA
PROTEIN sequence
Length: 225
MCEARVRAGAVEVNGAVCDDPELEVDPAGLELTVDGVTWAYREKAYVLVHKPAGYECSHHPSHHRSVFSLLPPPLLQRGVQCVGRLDQDTTGLLLFSDDGQFIHRMISPKKGVPKVYRAICADPLSDAMLDALRSGVQLNDEPAPIAALACEAIDTYTLRLSLAEGKYHQVKRMIAATGNRVEALHREAIGHYALPATLAPGEWRWLDDDDLKQLEQPWQSAMS*