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RTP_02272018_0_2um_scaffold_410_43

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 39560..41266

Top 3 Functional Annotations

Value Algorithm Source
MSHA biogenesis protein MshE n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F8D32B similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 568.0
  • Bit_score: 926
  • Evalue 1.30e-266
MSHA biogenesis protein MshE {ECO:0000313|EMBL:KIF82271.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 568.0
  • Bit_score: 935
  • Evalue 2.90e-269
general secretion pathway protein E similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 568.0
  • Bit_score: 918
  • Evalue 7.40e-265

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1707
ATGCCACGGCCGGAAAAAATCCGTCTGGGTGAAATCCTGGTACAACAAAAACTGCTTTCCCAGGAACAGCTCACATTTTCGCTGGAAGAACAAAAACGCACCGGGCGCAAAATGGGGCGTGTTTTTGTGGAAAACGGCTTTGTCACGGAAGAAGATATCTCCGGCGCGCTGGCCAGGCAGTTCTCGATCCCCCACATCAACCTCAAGCACTATAACGTCGATCCCGATGCCGCGCGGCTGCTGCCGGAAAGCCAGGCCCGGCGTTTTCGCGCCCTGGTGCTGGAACAGCGCAGCACAGGCACGCTGCTGGTCGGCATGGCGGACCCCGCGGACCTGTTCGCCTACGATGAAATTTCCCGGCTGCTGAAAAAGGACATCGATCTCGCGGTCGTAAACGAAGGCGCCCTGCTCCAGGCCATAGACCGCATCTACCGCAGAACGGAAGAGATTACCGACTTTGCCCGCGAGCTTGAGCAGGAACTGGGCGACACCGTTGTGGATTTCGGCGCCATGGGGATCGCGCCGGGCCTGGAAGAAGCGCCGGTCGTCAAGCTCCTGCAATCCGTATTCGACGACGCCGCCCAGGTGCAGGCATCCGATATCCATATCGAACCGCAGGAAGCGCGCCTGCAAATCCGCTTCCGCATCGATGGCGTGCTGCACCTGCAAACCGAGGCCGACATGAAAATCGCCCCGGCGCTGGCGTTGCGCCTCAAGTTGATGTCGAACCTCGACATCTCCGAAAAACGCCTGCCCCAGGACGGCCGTTTCGCCATCAAGGTCAGGCAGCAACAGATCGACGTGCGTATTTCCACCATGCCGACCCAGTTTGGCGAATCGGTCGTCATGCGCCTGCTGAATCAAAGCGGCGGAACGCTCAGCCTGGATTCAATCGGCATGCCGGCGGACATGCTGGAAAAGTTCCGCGCCATCCTCCAGCGCCCGAATGGCCTGGTGCTGGTGACCGGTCCCACCGGCAGCGGCAAAACCACCACGCTGTACGGCGCGCTGGCCGAGCTCAATTCCATGGCACGGAAGCTGATTACCGTTGAAGATCCGGTGGAATACCGCCTGCCCGGCATCAACCAGGTTCAGGTCAACGATAAAATCGAACTGAGCTTTTCCCGGGTGCTGCGCTCCGCATTGCGCCAGGACCCGGATGTGGTGCTGGTGGGCGAGATGCGCGACCAGGAAACCGCCCAGATCGGCATGCGCGCGGCCATGACCGGCCACCTGGTCTTGTCCACCCTGCACACCAACGATGCCGCCAGCACCCCCGTCCGCTTGCTGGACATGGGGGTGCCGCGCTACATGGTGGCCACCTCCCTGCAGGTGGTGCTGGCCCAGCGCCTGGTGCGCGTCATTTGCGAAAACTGCACCGAGTCCTACGCGTTGCACCCTGGCGAGCATGAATGGCTGAAAGCCGAACTGAAGGAGTCGGTTGACGCTCACCGCTACCTCCGCGGGCGCGGCTGCACGCACTGCAACGGCACAGGGTACCGGGGACGCACAGGCGTATATGAAATGCTCGAAATGACGGAAGCCGTGACGAATGCCGCCAGCCATCACGACCCGGCGCACTTCATCAAAGTGGCCAAAGCGCAAATGGCCGGACAGACGCTGCGCAGTCATGCCGTCGCCCTGGTCGCCGCCGGCAGAACCACCGTAGCCGAGGCGATGCGCATCAGCAACCAGTTTGAAGACTAA
PROTEIN sequence
Length: 569
MPRPEKIRLGEILVQQKLLSQEQLTFSLEEQKRTGRKMGRVFVENGFVTEEDISGALARQFSIPHINLKHYNVDPDAARLLPESQARRFRALVLEQRSTGTLLVGMADPADLFAYDEISRLLKKDIDLAVVNEGALLQAIDRIYRRTEEITDFARELEQELGDTVVDFGAMGIAPGLEEAPVVKLLQSVFDDAAQVQASDIHIEPQEARLQIRFRIDGVLHLQTEADMKIAPALALRLKLMSNLDISEKRLPQDGRFAIKVRQQQIDVRISTMPTQFGESVVMRLLNQSGGTLSLDSIGMPADMLEKFRAILQRPNGLVLVTGPTGSGKTTTLYGALAELNSMARKLITVEDPVEYRLPGINQVQVNDKIELSFSRVLRSALRQDPDVVLVGEMRDQETAQIGMRAAMTGHLVLSTLHTNDAASTPVRLLDMGVPRYMVATSLQVVLAQRLVRVICENCTESYALHPGEHEWLKAELKESVDAHRYLRGRGCTHCNGTGYRGRTGVYEMLEMTEAVTNAASHHDPAHFIKVAKAQMAGQTLRSHAVALVAAGRTTVAEAMRISNQFED*