ggKbase home page

RTP_02272018_0_2um_scaffold_301_6

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(5444..6865)

Top 3 Functional Annotations

Value Algorithm Source
rbcL; Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (RuBisCO large subunit) (EC:4.1.1.39) id=12496249 bin=THIO_MID species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 473.0
  • Bit_score: 936
  • Evalue 7.70e-270
rbcL; Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (RuBisCO large subunit) (EC:4.1.1.39) similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 473.0
  • Bit_score: 934
  • Evalue 8.30e-270
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338, ECO:0000313|EMBL:CAZ86891.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 473.0
  • Bit_score: 934
  • Evalue 4.10e-269

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiomonas arsenitoxydans → Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGGCAGTGAAGACCTATCAGGCCGGGGTAAAAGAATACCGGCACACTTACTGGATGCCGGAATACACCCCGCTGGATACCGACCTCCTGGCGTGTTTCAAAATCACCCCGCAGGCGGGTGTGGACCGTGAAGAGGCTGCTGCTGCTGTTGCCGCAGAATCGTCCACGGGTACCTGGACCACTGTGTGGACCGACCTGTTGACCGACATGGACTACTACAAGGGCCGTGCCTATCGCATTGAGGACGTCCCCGGCGACGATGCCTGTTTCTACGCATTTATCGCCTACCCGATCGATCTGTTCGAGGAGGGTTCGGTTGTCAACGTGTTCACCTCGCTGGTGGGTAACGTGTTCGGCTTCAAGGCCGTGCGCGCGCTGCGTCTGGAAGACATCCGCTTCCCGATCGCCTACATCAAGACCTGCGGTGGCCCACCCATGGGTATCCAGGTCGAGCGCGACATCATGAACAAGTACGGCCGTCCGATGCTGGGCTGTACCATCAAGCCGAAGCTGGGCCTGTCCGCCAAGAACTACGGTCGTGCCGTGTACGAATGTCTGCGCGGTGGTCTGGACTTCACCAAGGACGACGAGAACATCAACAGCCAGCCGTTCATGCGCTGGCGTCAGCGTTTCGATTTCGTGCAGGAAGCCACCCTGAAAGCCGAAGCCGAAACCGGCGAGCGCAAGGGCCACTACCTGAACGTGACCGCTTCGACCCCGGAAGAGATGTACAAGCGTGCGGAATACGCCAAGGAAATCGGCGCGCCCATCATCATGCACGACTACATTACCGGCGGTTTCTGCGCCAACACGGGCCTGGCCAACTGGTGTCGCGACAACGGCATGCTGCTGCACCTCCACCGCGCCATGCACGCTGTGGTCGACCGTAACCCGCACCACGGTATTCACTTCCGCGTGCTGACCAAGATTGCACGTCTGTCCGGCGGCGATCACCTGCACACCGGCACCGTGGTGGGCAAGCTGGAAGGCGACCGCGCTTCGACGCTGGGCTGGATCGATCTGCTGCGTGAATCCTTCATTCCGGAAGACCGCAGCCGCGGCATCTTCTTCGACCAGGACTGGGGTTCCATGCCCGGCACGTTCGCAGTTGCTTCGGGCGGTATCCACGTGTGGCACATGCCCGCACTGGTCAACATCTTCGGCGACGACTCCGTGCTGCAGTTTGGTGGCGGCACGCTGGGTCACCCCTGGGGCAATGCTGCGGGCGCCTGTGCGAACCGCGTTGCGCTGGAAGCGTGTGTTCAGGCGCGTAACGAAGGTCGCGAGATCGAGAAGGAAGGTAAGGAAATTCTTACCGCTGCCGCTGCCAGCAGCCCCGAACTCAAGATCGCCATGGAAACATGGAAAGAGATCAAGTTCGAGTTCGACACCGTCGACAAGCTGGACATCGCGAACAAGTAA
PROTEIN sequence
Length: 474
MAVKTYQAGVKEYRHTYWMPEYTPLDTDLLACFKITPQAGVDREEAAAAVAAESSTGTWTTVWTDLLTDMDYYKGRAYRIEDVPGDDACFYAFIAYPIDLFEEGSVVNVFTSLVGNVFGFKAVRALRLEDIRFPIAYIKTCGGPPMGIQVERDIMNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFMRWRQRFDFVQEATLKAEAETGERKGHYLNVTASTPEEMYKRAEYAKEIGAPIIMHDYITGGFCANTGLANWCRDNGMLLHLHRAMHAVVDRNPHHGIHFRVLTKIARLSGGDHLHTGTVVGKLEGDRASTLGWIDLLRESFIPEDRSRGIFFDQDWGSMPGTFAVASGGIHVWHMPALVNIFGDDSVLQFGGGTLGHPWGNAAGACANRVALEACVQARNEGREIEKEGKEILTAAAASSPELKIAMETWKEIKFEFDTVDKLDIANK*