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RTP_02272018_0_2um_scaffold_2272_6

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(3276..4649)

Top 3 Functional Annotations

Value Algorithm Source
channel protein TolC n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B4EB5 similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 440.0
  • Bit_score: 695
  • Evalue 2.20e-197
type I secretion outer membrane protein TolC similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 431.0
  • Bit_score: 622
  • Evalue 8.80e-176
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 440.0
  • Bit_score: 693
  • Evalue 1.20e-196

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1374
ATGCAATTAAAGCCTTTGTTTCTCGCACTGACATGGGCGCTGGCGCCTGCCGTCCAGGCCGCCAATTTGTCCGACATGTTCCGCGACGCGCAGGCCTACGACGCGCAGTATGCTTCCGCGCGCGCCGCCTGGCAGGCCGGCCAGGAAAAAGCGGTGCAGGGTCGCGCCGGGCTGCTGCCCAGCGTCAACCTGGGCGGCAATGTCCGCTACAACAGCGTCAACTCCACCCTGCCTGGCGGCGATGCCAACTATGACTCCAACGGCCTTTCGCTCAATGCGGCCCAACCGCTGTTCCGCATGCAGAACCGGGTGCAGTACGAGCAATCCAAAGGCCAGGTAAAGATCGCCGAAATGCAATTCAAGGCGGCCGGGCAGGATCTGATCCTGCGTGTGGCGCAAGCGTATTTCGATGTGTTGCAGGCGCAGGACAACATCGCCTTCATCGATTCGCAAAAATCCGCCATCACCGAACAGCTGGCTGCCGCCAAGCGCAACTTCGAAGTCGGCACCGCCACCGTCACCGACACCCACGAAGCGCAGGCGCGCTTCGACCTCGCGGTGGCACAGGAAATCGCCGAGCAAAACAGTCTCAGCATCCGCCTGCGTACACTGGAGAAACTCATCGGCAAACCGGCTGGCGCGCTCGATAGCCTAACTGAACTGAAACAGCCGAATGCCGAATCCGGCAACATCGACGAGTGGGCCGCGCGCGCAGCCGAAGGCAACCTGCAAGGTGAAATCCAGCGTCTGGCCAAAACCATTGCCGACCAGGAAGTCGAACGCAACCGTGCCGGCCACTACCCCACGGTCGATGCCGTTGCCGGCTACAGCATCAACAACGGCCAGAATTTTGGCAACCGGCAGGTCGACACCCGCACCGCCACCATCGGCGTCGAACTCAACCTGCCGATCTACCAGGGCGGGCTGACCAGTTCGCGCGTGCGCGAAGCCGTCGCCAACCAGGAAAAGGCGCGCCAGGATCTTGAAGTCGCCACCCGCGAAGCCAGCCTGCAGGCGCGCCAGGCCTGGCTCAACGTAAACAGCGGCGCCGCCCGCGTGCGCGCGCTGGAACAGGCGCTCACCTCCACCAAGGCGCAACTCGATTCCACCAAGCTGGGCCTGCAGGTCGGCGTGCGCACCAACCTCGACGTGCTGAACGCCGAGCAGCAGGTGCTGTCCGCCCAGCGCGATCTGGCCGGCGCGCGCTACGCCTACCTGTTGTCCGGCTTGTCGCTCAAGGCTGCGGTCGGCGCCCTCTCGGCCGCCGACCTGCAGACGATCGACAGGCTTTTGACCGGTCAGCGCAATAGTCCGGCCGCGCCCGCTGCCGATGTCGGGGCGGCAGCGGGGCCGGTGGCGCGTGTCCTGAAATAG
PROTEIN sequence
Length: 458
MQLKPLFLALTWALAPAVQAANLSDMFRDAQAYDAQYASARAAWQAGQEKAVQGRAGLLPSVNLGGNVRYNSVNSTLPGGDANYDSNGLSLNAAQPLFRMQNRVQYEQSKGQVKIAEMQFKAAGQDLILRVAQAYFDVLQAQDNIAFIDSQKSAITEQLAAAKRNFEVGTATVTDTHEAQARFDLAVAQEIAEQNSLSIRLRTLEKLIGKPAGALDSLTELKQPNAESGNIDEWAARAAEGNLQGEIQRLAKTIADQEVERNRAGHYPTVDAVAGYSINNGQNFGNRQVDTRTATIGVELNLPIYQGGLTSSRVREAVANQEKARQDLEVATREASLQARQAWLNVNSGAARVRALEQALTSTKAQLDSTKLGLQVGVRTNLDVLNAEQQVLSAQRDLAGARYAYLLSGLSLKAAVGALSAADLQTIDRLLTGQRNSPAAPAADVGAAAGPVARVLK*