ggKbase home page

RTP_02272018_0_2um_scaffold_798_8

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(6664..8403)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFS5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 612.0
  • Bit_score: 733
  • Evalue 1.60e-208
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 582.0
  • Bit_score: 813
  • Evalue 2.60e-233
Diguanylate cyclase {ECO:0000313|EMBL:AJP49225.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 582.0
  • Bit_score: 813
  • Evalue 1.30e-232

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodocyclaceae bacterium PG1-Ca6 → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1740
ATGGACAGTAAGGTCAATAATGACGCGTCTGCTACCGGCGACCCGGGCGGCCCGGGTCAACCGGGCCAGATCGAAGACAGGCTGGCAGCGGTCCTCGAAAAAGATATCGCGCGCAGGGAAAGCGCCGTCGTCGACGATGAAGCGGCCGTTCTGAGCCGCGAGAAATCGGCCACGGCACGGGAAGATGCCGCCGACTTGCGCGAAGACGCGGCCCAACTGCGCGAGGGCGCGGCGCAGCTGCGGGAAGGCGAAGCCCAGGAACGCGAAGGGGCCGCCACCTCGCGCGAGCTTGAAATTCGCGCGGCGGGGGCGCAGGCCGCGTCCGACGATCACATCCTGATGCTGCAGCAAGCCAACGCACACCTGGTCACCGCCAGCCTTGAAGCGCACAAACTGACCGAACAGGTCCAGGCCGCCAAAGATAATCTGGAGCATCTGGTCCACCACGATGTGCTCACCGATTTGCCCAATCGAACGCTGCTGCAGGACCGGCTTGGCCAGGCGATCGAGCTGGCCCGCCGTCAAGACAGGCAGCTTGCGGTGATGTTCATGGATCTGGATCAGTTCAAACACATCAACGACTCCCTGGGGCACACTGTAGGCGACCAGCTGCTGCAGTCGGTTGCGCAACGCCTGGTGGGGTGCGTGCGTCACTCGGACACCGTCAGCCGCCAGGGGGGCGATGAATTCGTGCTGCTGCTGCCCTATATCGAGCACGCAGAAGACGCGGCGCTGTCCGCGCAAAAGCTGCTCGCGGCGCTGGTGCTGCCGCACCGCATCGACGGACACACGGTCCACATCGGCGCGAGCATCGGCATCAGCATCTACCCCGACGATGGTCTGGATGCGGAAACCCTGATCAAGTGCGCAGACAGCGCGATGTACCATGCCAAGGAAAACGGACGCAACAATTACAAGTTTTTCGAGCAGAGCATGAATGTTCGGGCCGTCGAGCGGCAAGCCATCGAGGGGGGGCTGCGCCGCGCGCTGGAATTGCAGGAATTCGTGTTGCACTACCAGCCGAAAATCAATCTTCAGAGCGGCGCGATCGTCGGCGTCGAAGCGCTGGTCCGCTGGCAGCATCCGCAACGCGGGCTGGTTTCGCCCGCGCAGTTCGTGCCCATCGCCGAAGACTGCGGCCTGGTCCTGCCGATCGGACGCTGGGTGCTGCGCGAGGCCTGCAACCAGGCCCGGGCCTGGTTGCAGGCGGGTTTGCCGCCGATCGCCGTCGCCATCAACGCCTCCGCGCCCGAGTTCCACGCCAAGGATTTTTTCGAAAATATCCGCGCGACCCTCGCGGAGTCACGTCTGGAGCCGCGCTATCTGGAACTCGAACTGACCGAAAGCGTCCTCATGCGCGATGCCGAGGCTACCGATGCCGTGCTGCATGCGCTCGCAGACCTGGGCGTCCAACTCGCGGTCGATGACTTCGGCACCGGCTATTCCAGCCTGAGTTATCTGAGGAAGTTTCCGATCGATACCCTGAAGATCGACCAGTCGTTCGTGAACCAGATGATCGGCAACCCGGACGATGCCGCCATCGTCAGTGCCGTGATCGGCATGGCTAAAAGCCTCAGGCTCCGCGTCATCGCGGAGGGCGTGGAAACTCCCGCGCAGGTTGCCTTTCTTCTGGCCCAGAAGTGCGACGAGGGCCAGGGCTACCATTTCGGCCGCCCGATGGCGGCGGAGGCGCTCGCCGCCTTGCTGCAATCGGGCCTATCTCCTCCCCTTCTCCATTGA
PROTEIN sequence
Length: 580
MDSKVNNDASATGDPGGPGQPGQIEDRLAAVLEKDIARRESAVVDDEAAVLSREKSATAREDAADLREDAAQLREGAAQLREGEAQEREGAATSRELEIRAAGAQAASDDHILMLQQANAHLVTASLEAHKLTEQVQAAKDNLEHLVHHDVLTDLPNRTLLQDRLGQAIELARRQDRQLAVMFMDLDQFKHINDSLGHTVGDQLLQSVAQRLVGCVRHSDTVSRQGGDEFVLLLPYIEHAEDAALSAQKLLAALVLPHRIDGHTVHIGASIGISIYPDDGLDAETLIKCADSAMYHAKENGRNNYKFFEQSMNVRAVERQAIEGGLRRALELQEFVLHYQPKINLQSGAIVGVEALVRWQHPQRGLVSPAQFVPIAEDCGLVLPIGRWVLREACNQARAWLQAGLPPIAVAINASAPEFHAKDFFENIRATLAESRLEPRYLELELTESVLMRDAEATDAVLHALADLGVQLAVDDFGTGYSSLSYLRKFPIDTLKIDQSFVNQMIGNPDDAAIVSAVIGMAKSLRLRVIAEGVETPAQVAFLLAQKCDEGQGYHFGRPMAAEALAALLQSGLSPPLLH*