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cn_combo_scaffold_16_22

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(20379..21386)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide-modifying protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q7I7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 335.0
  • Bit_score: 655
  • Evalue 2.40e-185
Lipopolysaccharide-modifying protein {ECO:0000313|EMBL:EKF61195.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agro similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 335.0
  • Bit_score: 655
  • Evalue 3.40e-185
glycosyl hydrolase similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 320.0
  • Bit_score: 257
  • Evalue 5.50e-66

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGAAGCTCCCTGCGCTCGATAAAACGGCAAAGACCATAAATCGCGTGCGTTACTATGCAGCCGGCATTACGCGACATGCGGTGCCGCGCGAATGGTACCTCCAGCGGTGCAGACAGATCCTCGGCGAGCTCGAGGCATCACCCGAGCTCGAAGAGCTGATGCGAAGGGCGAACTACTACAACAGATTGCCCCCATGCTCCGTCGAGCCCGGCACGAGATTGAACGCGGTGGACCGGGCCCAGAGCCGCTATTACTTCGATCTCGACGAGTATCTGCGCTATTTTCCCTGTCGGTTGAAGGTCGATTATCTCTTCGGCGACGTGACATGGGTTCCAAACACGCCAAGCATCGTCAAGAGCCGCCCGACCGGAGGGGAGAACGGAAACTCCGTGCTTCTGAACCTCGACAAGCTCCGGCATTTCCGGCTATGCGCCGACGACACGCCCTGGGAGAAGAAGAAGCCGATGGCCGTGTGGCGCGGAGCGCTCAACAATCCACTCCGCATGGAATTGCTACGCCGGCATCATGAGAGCGCGTCTGCCGATGTCGGCCATATCGGAGAAACAAAAGACGGTGTCCAGGCCAAAGGCTTCCTCAGCCCGCAGGACCAGATGGGCTATCGCTATATCCTGTCCATCGAGGGCTTCGACGTCGCCACCAACCTGAAATGGATCATGGCTTCGCGCAGCGTCTGCGTGATGCCGAAGGGGCGCTACGAGACATGGTTCATGGAAGGCGGCCTGATCCCCGACCATCACTTCGTCGAAGTACGCCCTGATTTCAGCGACCTCGAGGACAAGATCGCCGAGCTGGAACGCAATCCGCAATGGGCGCAGGACATCGTGGCCAATGCCAATGCCTATGTCGCCTCGTTCTGCGATCGCAAGACCGAGCGCAAGATCTCCCTGCTGGTGCTTCAGAAGTATTTCGAAGCGACGGGGCAGCTTCCCCCGTCAGCCTTCAGCCCGCTGTTCTTTCAGCAGACGCGCGAATTACAGCCTGCATGA
PROTEIN sequence
Length: 336
MKLPALDKTAKTINRVRYYAAGITRHAVPREWYLQRCRQILGELEASPELEELMRRANYYNRLPPCSVEPGTRLNAVDRAQSRYYFDLDEYLRYFPCRLKVDYLFGDVTWVPNTPSIVKSRPTGGENGNSVLLNLDKLRHFRLCADDTPWEKKKPMAVWRGALNNPLRMELLRRHHESASADVGHIGETKDGVQAKGFLSPQDQMGYRYILSIEGFDVATNLKWIMASRSVCVMPKGRYETWFMEGGLIPDHHFVEVRPDFSDLEDKIAELERNPQWAQDIVANANAYVASFCDRKTERKISLLVLQKYFEATGQLPPSAFSPLFFQQTRELQPA*