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cn_combo_scaffold_36_41

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(43426..46278)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I548_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 956.0
  • Bit_score: 936
  • Evalue 2.00e-269
Strain MEJ076 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ03461.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 919.0
  • Bit_score: 1251
  • Evalue 0.0
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 956.0
  • Bit_score: 936
  • Evalue 5.70e-270
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2853
ATGTTCATGGTGTCCACAGCACTGGTTTCGGCTTCGGCCGGTGTATTTGAGGTTCGAGCGCAGGATGCCGGGACAAGTCCGACGACGAATGCTCCCCGGTCGATCTCGATCCCTGCACAGCCGCTTGATGCAGCCCTCAGGGCCTTCACGCGTCAGACGGGCTGGCAGGTCGGCTATGCCGCAGCCCTCGTGTCTGGACGGACTTCAGCGGCCGTCGCCGGTGAAACCGATCCTCTCGTCGCACTGCGCGCCCTCACCGCCGGTTCAGGAATCGAGATCCGCGTAACCGGGGCCCGCACCGCATCGCTGGTTGCCGAAGGCACGATCGACGAAGCCGCTGCCGCCGGCACGACCGTTCTTGAGGAAATCACGGTGTCGTCCTCCGGCGGCGGCGTGAAACTCGGAACCGAGAGCGCGGCGGATACGGGCACCAGCACGCTGAGCGAAGGTCAGATCTCAGCGCGGGCTGAAGGAAGTGATGCGAACGGGATTTTGCGCAACCTGCCCAATGTTCAGTATCAGAATGACATTGATGACGACGCCGGCGCGACGGACCAGACCGTCATCGACCTGAAGCCTCGGGAGGTGTCCATCTCCGGAGCGCGCGTCTACGAAAACAACTTCATCCTAGAAGGTATGGAGATCAACACCGTCACGGGTAGTCAGGAGCGCTACGGCGATGAGGTGCTCGCAGATCGAACCATCACCCCGCCGAATGCTGACCGCGTCTACGGCCTCCATTCTCAGACCGTTTTTGTGCCTGCAGAGTTCCTGACCGAAGCAACGGTTATCGATAGCAATGCGTCGGCCAAGTACGGCAACTTCCAGGGAGGTGTCGTGTCCTACAAGCTGGAAGAGGCAGAGAAAGAAAAATGGAAAGGCCATGTTTCCACCGACTACACGACGAGTGACTGGACGTCGTATAACTTAGGAACCAAGGATGGCCTGAACCCGAAAGACGTCGCACGCAACGAATATATCAAGCGCCGCCAGGCGATTTCCGTGGGCGGCCCGCTTTCCGATAATCTTTCTGTTCGACTGCAGTATAGCCGTCAGGACGCTGTGACCGATAAGGACAAGGCCTATCGGTATACCGAAACGGACCGCATAGAGCAGGACTCGCTGAACCAGTTCTACCGCGGCCAGCTGAAAGCCGAGACGGACCTTGGGGATTTCACCCTGGAGGGAGCATTCACGGCCTATGATCAGGTTTGGGAACACGCCTTGTGGCGCAATTTCCGACTGAACACTGAGACCCGTAGTCTGGCGTCGAAGCTACAGCATGACTACGAGTTCGAGGATCTGGACTTGGGCGGGGTCGCCATTTCGAACCTGAAGCTGGAATCCAAACTGACATATGGGACCTCAGACACGTTGAACGACATGAATGCGAACGTCGCGCATGCTTACATGCAGGCCTTCAGACGATCGGCAGCGAACGGAGGGGGCTTGTGGGAGTCGACCGAACTCTCCGACTGGTGCCGTACCGATACAACTGTTTCACAGACGATTTGCTATGATGGTGCCACAGGAGACAAGCAGCAGGGTCAGGATCAGTTCGGCTGGAACGAGGAGTTGACCGGAGATATCTGGAGCGGCTCGTTCCTCATCGGCACGGAGTTCAAGCACACGAAGGGCCATCGTCGTCGCCCCGAAGATGCCATATATTACACCGCGTATACTTCCCTTGGCCAAGTGCCAACGTCGGTTACGGGCTTCGTTTGCAATACTACCGAGGAATGCAGCACCGAACAGTTTGCCAGCTCCAAGGGGATTGATAAGGCTTTTGATATCACAGCGCAGGTGAACACTTTCGCCACCTATGCAGAGCTGGAGCAGGACTGGGACTGGTTCGAGATCCGGGCTGGAGCCAGGTTGACCTACGACGACTACATGGAGAATCTCGATATTGCTCCGCGGGCAGTTGCTACCTGGAAACCGATTGAAGACCTTGCCTTAACACTCGGTGCAAACCGCTACTACAACGCCCAAAGCCTCGCATTCGCGATCCGTGATCAGCAGCCGCGACGCCAGAACTATATACGAGTTCGATCAGGCGCAACGGTCGGATCAACTTGGAGTCCCGCGGCCATTACAGGCAACTACACCAACAGCGCGTCTGATCTGGAAACACCATACACGGACGAAGTCAGTATAAGCCTGAGCGGTGTCGAGCCGCTTTTTGATGGCGAGTGGCGTTTACGCTTCCTTGACCGGCAATCCAAAAGCCAGTTCGCTTCGGAAGCGGTTGGCCAGAGCCGTTTCCTAACGAACAACGGATCAGGCGCATATCAGTCCTTCACAGCGGAGTATTCCAAGAACCTTGAGCTTCAAAGCGCATGGGGACTTGATGAGGCGCTGTTCAACGCCTCGATCACCTGGTCACGCAACGAAGTGTCGAACAACAGCTACTTCGAGACTGATTTAGAAGACGAATACGTCTGGTACAAGAACAAGTCTTACACTCTTGCCGGGTTCAGTGTCGTAACTGGCAACATGGACATCCCGCTCCGAGCCCAGACCGGCCTTTCGACAAAATGGCTGGACAACAGACTGACGCTGGATCTCAACGCCAATTACAACTTCGGTTATACGGGCGTGAAGAATACAGACCAAAATCCGATTGTGATCGATGGGCTGTCTCACGAAATCTACGAGGATTTTGACTTTGACCCGACGCTAACAGTGGATCTTGCTGCGAGCTACAAGGTGTACGAAGAAGAGGATCGCGGCATGACCGTGAACTTGAAGGTCAACAACCTGTTCAACGAGATTGGAAACGCAACGGCATCTGCCAATAACCCCTGGGTCATCGGCCGCACTCTCTGGGTCGGAGCCTCTGCGAAGTTTTGA
PROTEIN sequence
Length: 951
MFMVSTALVSASAGVFEVRAQDAGTSPTTNAPRSISIPAQPLDAALRAFTRQTGWQVGYAAALVSGRTSAAVAGETDPLVALRALTAGSGIEIRVTGARTASLVAEGTIDEAAAAGTTVLEEITVSSSGGGVKLGTESAADTGTSTLSEGQISARAEGSDANGILRNLPNVQYQNDIDDDAGATDQTVIDLKPREVSISGARVYENNFILEGMEINTVTGSQERYGDEVLADRTITPPNADRVYGLHSQTVFVPAEFLTEATVIDSNASAKYGNFQGGVVSYKLEEAEKEKWKGHVSTDYTTSDWTSYNLGTKDGLNPKDVARNEYIKRRQAISVGGPLSDNLSVRLQYSRQDAVTDKDKAYRYTETDRIEQDSLNQFYRGQLKAETDLGDFTLEGAFTAYDQVWEHALWRNFRLNTETRSLASKLQHDYEFEDLDLGGVAISNLKLESKLTYGTSDTLNDMNANVAHAYMQAFRRSAANGGGLWESTELSDWCRTDTTVSQTICYDGATGDKQQGQDQFGWNEELTGDIWSGSFLIGTEFKHTKGHRRRPEDAIYYTAYTSLGQVPTSVTGFVCNTTEECSTEQFASSKGIDKAFDITAQVNTFATYAELEQDWDWFEIRAGARLTYDDYMENLDIAPRAVATWKPIEDLALTLGANRYYNAQSLAFAIRDQQPRRQNYIRVRSGATVGSTWSPAAITGNYTNSASDLETPYTDEVSISLSGVEPLFDGEWRLRFLDRQSKSQFASEAVGQSRFLTNNGSGAYQSFTAEYSKNLELQSAWGLDEALFNASITWSRNEVSNNSYFETDLEDEYVWYKNKSYTLAGFSVVTGNMDIPLRAQTGLSTKWLDNRLTLDLNANYNFGYTGVKNTDQNPIVIDGLSHEIYEDFDFDPTLTVDLAASYKVYEEEDRGMTVNLKVNNLFNEIGNATASANNPWVIGRTLWVGASAKF*