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cn_combo_scaffold_17_8

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(15017..15907)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QVX6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 296.0
  • Bit_score: 566
  • Evalue 2.20e-158
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF59412.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agr similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 296.0
  • Bit_score: 566
  • Evalue 3.20e-158
putative transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 296.0
  • Bit_score: 453
  • Evalue 3.50e-125
  • rbh

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGGAACTTCGCCAACTCTCATACTTCGTGGCTGTTGCCGAAGAGCTGCATTTCGGTCGTGCCGCCATGCGGGTAAACATCGCCCAGCCGGCACTGAGCACGCAGGTCCAGGCGCTGGAAAAGGGACTCGGCGTCCAGTTGCTGACACGCTCAACCCGCAAGGTGGAACTGACGCGGGCAGGGGAAGTGTTCTACGATCGCTGTGTCAGGATGCTGGGAGAACTGGATCTGTCAGCAGAGATGGCGCGTGCAGCTGGGGGCAGGACCATGCGAGAGATCAGGATCGGCACGATCTATCCGGCAACGACAGGGGTACTGCCGGCATTTCTCGCCCGGATTGGTCGGAAGTTTCCCGACATCCGTCTGCATGTCTCGAATGGTTCGACATCGGAGATCATCCGCCAGCTGGAATGCGGCAAGCTGAACCTTGGCTTCATCCGGCCCGTCGAAAACATCGGCTCGCTGCGCTTCTTCTCGATTGCCCATGAGCGTTATCTGCTGGCAGTGCCAATGGGAAACCCGCTCGCCTCGAAGCACGAGGTTACGATCGAGGATCTGAGGGCCGAGAAGATCATCGCTTTCAAGCGGCAGAACCTTTCCTACACCGAGCGCTATTTTGCAGAGACCTTCGACGAGCATGGGCTGAATGACAATGTCGCCTATACTTGTGACGACACCTTCTCGCTGATCTCGCTTGTCTCCTCAGGTCTTGGTGTCGGCTTCGCACCGGAATGGACGGCAGAACTGCCGGGGAGGGATGTGGTGCTGAAGAAGGTCACCGGCATCGACCTGAAGATCGGGCTTGGTGTCGCCTGGAGCAAGGATGATCCGACGGCAGCACGGGATGACATCATCGATATTGCGAGGACGCTGGGACGACCGGGCAGGTGA
PROTEIN sequence
Length: 297
MELRQLSYFVAVAEELHFGRAAMRVNIAQPALSTQVQALEKGLGVQLLTRSTRKVELTRAGEVFYDRCVRMLGELDLSAEMARAAGGRTMREIRIGTIYPATTGVLPAFLARIGRKFPDIRLHVSNGSTSEIIRQLECGKLNLGFIRPVENIGSLRFFSIAHERYLLAVPMGNPLASKHEVTIEDLRAEKIIAFKRQNLSYTERYFAETFDEHGLNDNVAYTCDDTFSLISLVSSGLGVGFAPEWTAELPGRDVVLKKVTGIDLKIGLGVAWSKDDPTAARDDIIDIARTLGRPGR*